Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MIR8081-201ENST00000611533 95 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AC110994.2-201ENST00000635481 492 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 MIR583-201ENST00000384846 75 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 MTND4LP20-201ENST00000402379 270 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AL512604.1-201ENST00000404812 257 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 RPS3AP44-201ENST00000425466 790 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AC006946.1-201ENST00000429106 328 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AC236972.1-201ENST00000433225 199 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 MTND2P19-201ENST00000449129 1012 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 EEF1B2P7-201ENST00000451177 676 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 MTCO1P42-201ENST00000457379 726 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AC055855.1-201ENST00000489563 579 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AC074050.1-201ENST00000563247 211 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AC093673.2-201ENST00000609674 331 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 AC009950.2-201ENST00000636548 183 ntBASIC1.37□□□□□ -2.19
TCRBV3S1A0A5B6 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 FGF7P5-201ENST00000441829 291 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC097499.1-201ENST00000444277 208 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 RPL7P36-201ENST00000444633 681 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC104564.1-201ENST00000493028 407 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC026801.1-201ENST00000497178 464 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 RPL23AP63-201ENST00000498752 471 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 KATNBL1P4-201ENST00000503545 918 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC093770.1-201ENST00000511559 571 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AP005597.4-201ENST00000526762 229 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 CYCSP2-201ENST00000558168 301 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 MIR4299-201ENST00000577899 72 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC011260.1-201ENST00000578420 472 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC025588.2-201ENST00000604851 466 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC110792.4-201ENST00000609843 298 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC009318.2-201ENST00000610917 651 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 AC011330.2-201ENST00000621680 635 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 IGHVIII-44-202ENST00000636235 289 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 U6.107-201ENST00000637108 79 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 OR4G2P-202ENST00000641004 1759 ntBASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.36□□□□□ -2.19
TCRBV3S1A0A5B6 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 RNU6-730P-201ENST00000383954 104 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 RNU6-253P-201ENST00000384730 105 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 RNU6-220P-201ENST00000390919 107 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 RN7SKP192-201ENST00000411291 327 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 HSPE1P21-201ENST00000438283 308 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AL500527.1-201ENST00000448532 255 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AC005297.2-201ENST00000450430 606 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 RNU7-23P-201ENST00000459465 62 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AC068781.1-201ENST00000488231 618 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 C1DP5-201ENST00000525775 383 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AL355877.2-201ENST00000603670 358 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AC005034.5-201ENST00000604219 466 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AC138473.1-201ENST00000605717 526 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 AC010678.1-201ENST00000614118 713 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TCRBV3S1A0A5B6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 MIR483-201ENST00000385070 76 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 RNU6-1197P-201ENST00000391183 107 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AL161449.1-201ENST00000414531 1199 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 CYCSP48-201ENST00000417124 323 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AL353689.1-201ENST00000438895 199 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AL357134.1-201ENST00000445848 426 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 MTND4LP3-201ENST00000468320 276 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AC093801.2-201ENST00000503966 1050 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms