Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AL512844.2-201ENST00000433990 593 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AL121871.1-201ENST00000443413 436 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 DDX3P2-201ENST00000446138 111 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 UBE2DNL-203ENST00000474922 222 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC108734.3-201ENST00000481241 1165 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC008427.1-201ENST00000503102 655 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC107393.1-201ENST00000512403 346 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 RNU5A-7P-201ENST00000515979 116 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 SCARNA17.1-201ENST00000516211 143 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 SCARNA17.2-201ENST00000516334 143 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 RNU6-1282P-201ENST00000516735 96 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 ARL2BPP5-201ENST00000523141 481 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 NDUFS5P6-201ENST00000529136 295 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 CR383656.7-201ENST00000548164 174 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 NIFKP8-201ENST00000560500 874 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AL355877.2-201ENST00000603670 358 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 SNORD14A-201ENST00000606526 91 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC005332.10-201ENST00000612725 619 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 SCARNA17.4-201ENST00000614296 143 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 RMST_10.1-201ENST00000616309 154 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC012640.5-201ENST00000623897 319 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 MFSD8-213ENST00000641134 1327 ntBASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC104454.1-201ENST00000421341 1401 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 SNORD116-23-201ENST00000384645 92 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 MIR524-201ENST00000385242 87 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 RPL17P50-201ENST00000396131 546 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 NPM1P10-201ENST00000398310 865 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AL139098.1-201ENST00000407291 389 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 RNU6-1328P-201ENST00000410938 106 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 Z85995.1-201ENST00000415547 335 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 SPA17P1-201ENST00000416656 452 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 BEND7P1-201ENST00000422058 457 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 PSMA6P3-201ENST00000428242 164 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 USP12PX-201ENST00000432383 1057 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC007000.2-201ENST00000442564 487 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC092757.1-201ENST00000467293 467 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 SULT1C2P1-202ENST00000562418 459 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 ADAM3B-201ENST00000569937 840 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 MIR4648-201ENST00000580107 72 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 MIR3616-201ENST00000584070 92 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AL031176.1-201ENST00000604554 466 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AL590099.1-201ENST00000615276 138 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC011330.2-201ENST00000621680 635 ntBASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRBV6-4A0A1B0GX49 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
TRBV6-4A0A1B0GX49 AL109809.4-201ENST00000603520 2185 ntBASIC1.34□□□□□ -2.2
TRBV6-4A0A1B0GX49 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 U3.40-201ENST00000408706 208 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 RNU2-2P-201ENST00000410396 191 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 RNA5SP489-201ENST00000410986 109 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 NDUFB4P7-201ENST00000423198 363 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 IPO7P1-201ENST00000442031 636 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 AL050341.1-201ENST00000447743 313 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 MTND5P8-201ENST00000449817 1083 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 TRGVB-201ENST00000453257 471 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 ANKRD26P4-201ENST00000455755 950 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 AC097493.1-201ENST00000463958 372 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 RPL30P9-201ENST00000465586 330 ntBASIC1.33□□□□□ -2.2
TRBV6-4A0A1B0GX49 MTAPP1-201ENST00000489154 819 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms