Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC124283.4-201ENST00000581815 456 ntBASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 RPAP2P1-201ENST00000603626 1168 ntBASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AP001521.1-201ENST00000609150 300 ntBASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AC025594.3-201ENST00000613068 790 ntBASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AC090132.2-201ENST00000615881 347 ntBASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AC006213.4-201ENST00000616184 634 ntBASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AC009831.4-201ENST00000620744 325 ntBASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AC011330.2-201ENST00000621680 635 ntBASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AC090772.4-201ENST00000623599 362 ntBASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV41A0A0B4J266 AC005336.3-201ENST00000623833 2679 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 RNU6-878P-201ENST00000384578 110 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AL035405.1-201ENST00000400795 710 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 SNORA11.4-201ENST00000408823 129 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 LUZP4P1-201ENST00000415420 344 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 Z85995.1-201ENST00000415547 335 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 SPA17P1-201ENST00000416656 452 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AL356867.1-201ENST00000429623 299 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 GTF2IP20-201ENST00000431663 360 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 VN1R10P-201ENST00000447106 875 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 USP9YP34-201ENST00000453983 808 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 KLRA1P-201ENST00000503499 986 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AC107222.1-201ENST00000510899 637 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 NDUFS5P6-201ENST00000529136 295 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AC007115.1-201ENST00000546853 234 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 LRRC37A5P-203ENST00000580181 585 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AL355877.2-201ENST00000603670 358 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AC093838.1-201ENST00000613014 469 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AL160394.1-201ENST00000624765 724 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 MIR7515-201ENST00000637837 67 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 DBF4P1-201ENST00000412976 1892 ntBASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV41A0A0B4J266 AC004944.1-201ENST00000517807 3059 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 SNORA6-201ENST00000384033 151 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 MCTS2P-201ENST00000394552 546 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 RPS3AP24-201ENST00000407896 734 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 PTGES3P2-201ENST00000407942 482 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 RNU2-43P-201ENST00000410306 190 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 RNU6-920P-201ENST00000410926 92 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 Z98742.3-201ENST00000418637 326 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AC099548.1-201ENST00000421443 426 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 BEND7P1-201ENST00000422058 457 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 NDUFB4P7-201ENST00000423198 363 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AL512637.2-201ENST00000431287 1256 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 UBE2D3P1-201ENST00000436669 444 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 PGBD4P3-201ENST00000440731 581 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 TRGVB-201ENST00000453257 471 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AC008379.1-201ENST00000463655 464 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 COX7A2P2-201ENST00000505291 250 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AC104090.1-201ENST00000506341 1171 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 TTC39CP1-201ENST00000512513 755 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 SCARNA11.3-201ENST00000517276 130 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AC078814.3-201ENST00000553036 491 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AC098483.2-201ENST00000603158 454 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AP003973.1-201ENST00000604639 691 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 MIR6840-201ENST00000611937 71 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AC005332.10-201ENST00000612725 619 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 U6.101-201ENST00000637707 76 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 MTCO1P4-201ENST00000520516 1409 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 MTND5P6-201ENST00000422338 1798 ntBASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
TRAV41A0A0B4J266 CCT4P2-201ENST00000233836 1548 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms