Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC013828.1-201ENST00000481845 158 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AC090096.1-201ENST00000489168 390 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 COX6CP5-201ENST00000527162 228 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 SNORD53-201ENST00000579969 78 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 MIR4658-201ENST00000584344 65 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AC005498.1-201ENST00000592125 465 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL022067.1-201ENST00000602426 454 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 MIR325-201ENST00000385260 98 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 TAF13P2-201ENST00000416876 286 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 Z75741.2-201ENST00000417272 1167 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 MORF4L1P6-201ENST00000418771 268 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AL590383.1-201ENST00000428602 75 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 THAP5P1-201ENST00000439089 262 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 BMI1P1-201ENST00000445879 941 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 GXYLT1P1-201ENST00000446657 490 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 COX6CP12-201ENST00000446748 202 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 DPPA3P1-201ENST00000448050 469 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 FAM172BP-201ENST00000487497 1089 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 SNORA31.22-201ENST00000517204 135 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 ATP5F1P5-201ENST00000526403 760 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC024224.1-201ENST00000538284 609 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC093510.2-201ENST00000562820 896 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 MIR4513-201ENST00000581077 86 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC100814.1-201ENST00000606963 623 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC092954.1-201ENST00000609121 445 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC013562.2-201ENST00000611632 603 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AC245884.12-201ENST00000615364 59 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 MIR6873-201ENST00000622788 63 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AL160394.1-201ENST00000624765 724 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 CU459211.1-201ENST00000635667 749 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HDGFL3Q9Y3E1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
HDGFL3Q9Y3E1 AC022336.2-201ENST00000568966 2538 ntBASIC1.96□□□□□ -2.09
HDGFL3Q9Y3E1 MTND5P6-201ENST00000422338 1798 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 RNU5A-1-201ENST00000362698 116 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 RN7SKP226-201ENST00000364912 300 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 RNU6-76P-201ENST00000384060 104 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 MIR524-201ENST00000385242 87 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AP002784.2-201ENST00000397300 549 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AL356131.1-201ENST00000405826 414 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 RNA5SP425-201ENST00000410336 112 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AL513331.1-201ENST00000411908 397 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 HMGB3P2-201ENST00000411913 584 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AC005005.2-201ENST00000420779 380 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AL139413.1-201ENST00000421309 217 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 MTCO3P1-205ENST00000422088 832 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AC092757.1-201ENST00000467293 467 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 BOLA3P3-201ENST00000505182 232 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 NDUFB4P2-201ENST00000509515 391 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AC008413.1-201ENST00000511864 177 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AC118465.1-201ENST00000513820 1271 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 MIR1273D-201ENST00000577266 86 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms