Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU6-358P-201ENST00000516564 75 ntBASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 NRBF2P5-201ENST00000603087 788 ntBASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 AL162413.1-201ENST00000603198 110 ntBASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 RNA5SP108-201ENST00000605921 117 ntBASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 AC004908.2-201ENST00000609090 574 ntBASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 AC128687.2-201ENST00000609657 566 ntBASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 RPS4XP5-202ENST00000449995 1334 ntBASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX2IPQ9Y2D8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 MTCO1P24-201ENST00000515438 1558 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 SNORA72.1-201ENST00000363485 129 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 Y_RNA.493-201ENST00000384422 102 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 Y_RNA.548-201ENST00000384656 105 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 MIR19A-201ENST00000384878 82 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 MIR199A2-201ENST00000385289 110 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-278P-201ENST00000390945 109 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 RNA5SP56-201ENST00000410277 118 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 ZNF90P2-204ENST00000419323 1075 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AL035423.1-201ENST00000420331 213 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC005517.2-201ENST00000424673 553 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC091286.1-201ENST00000431233 461 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 FTH1P1-201ENST00000437933 532 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 RPL7P54-201ENST00000438336 674 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC079781.2-201ENST00000446424 169 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC117522.1-201ENST00000509821 380 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 RN7SKP18-201ENST00000516005 275 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-352P-201ENST00000516908 107 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC090572.1-201ENST00000519251 160 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 IGKV2D-19-201ENST00000523346 262 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 MIR5047-201ENST00000579212 100 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC007621.1-201ENST00000604544 437 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC007038.2-201ENST00000608095 740 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC093788.1-201ENST00000609356 927 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC245517.5-201ENST00000611529 162 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AL020991.1-201ENST00000612314 373 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AC012314.7-201ENST00000619693 93 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 AL356585.4-201ENST00000623078 1229 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 U6.98-201ENST00000637157 84 ntBASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX2IPQ9Y2D8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 MIR208A-201ENST00000362287 71 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-989P-201ENST00000362756 107 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-1078P-201ENST00000364522 103 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 RNA5SP167-201ENST00000365461 116 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 RNY3P13-201ENST00000365542 102 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-356P-201ENST00000384140 107 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 PTMAP5-201ENST00000393073 333 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 RPS4XP8-201ENST00000402039 771 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 MRPL50P2-201ENST00000416821 482 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 ZNF863P-201ENST00000426746 417 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AL121601.2-201ENST00000438019 707 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 CALM1P1-201ENST00000442082 433 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 RANP8-201ENST00000444720 713 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 RPL29P29-201ENST00000448725 423 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 PRSS3P4-201ENST00000453323 162 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms