Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 AC099654.14-201ENST00000638599 341 ntBASIC4.18□□□□□ -1.74
SCAF8Q9UPN6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCAF8Q9UPN6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.18□□□□□ -1.74
SCAF8Q9UPN6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCAF8Q9UPN6 MTND5P33-201ENST00000571250 1450 ntBASIC4.18□□□□□ -1.74
SCAF8Q9UPN6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 Y_RNA.450-201ENST00000384198 113 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 Y_RNA.510-201ENST00000384511 114 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 RPS3AP36-201ENST00000398190 775 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 MIR1277-201ENST00000408536 78 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL159169.1-201ENST00000421119 127 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 MIR2114-201ENST00000516645 80 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 SUMO2P20-201ENST00000520803 283 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AP004371.1-201ENST00000525240 214 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AC034268.2-201ENST00000571784 482 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL162713.1-201ENST00000604480 262 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL033523.1-201ENST00000605153 153 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 HMGN2P28-201ENST00000606102 262 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL592295.2-201ENST00000612578 206 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AL162274.2-201ENST00000614406 332 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AC136475.10-201ENST00000620253 385 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 AC092794.2-201ENST00000620933 563 ntBASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCAF8Q9UPN6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 Y_RNA.9-201ENST00000362354 101 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 RNU6-1155P-201ENST00000363554 107 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 Y_RNA.296-201ENST00000364930 108 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 Y_RNA.372-201ENST00000365599 102 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 RPL5P18-201ENST00000406671 891 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 RNU2-47P-201ENST00000410649 186 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 RN7SKP53-201ENST00000411337 315 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AL109913.1-201ENST00000421173 514 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 HMGB1P31-201ENST00000437242 427 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 RPL22P17-201ENST00000438729 315 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 MTND6P13-201ENST00000443510 523 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 GAPDHP17-201ENST00000449858 1001 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC020893.1-201ENST00000502452 580 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC139783.2-201ENST00000504847 1145 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 RNA5SP341-201ENST00000516261 117 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 MIR4325-201ENST00000583049 90 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC006504.3-201ENST00000586818 523 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 BRDTP1-201ENST00000605735 677 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 HMGB1P50-201ENST00000605814 607 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 MIR6130-201ENST00000619419 109 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 MIR6863-201ENST00000636112 90 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 MIR4275-201ENST00000636486 87 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 AC073073.2-201ENST00000609827 2578 ntBASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCAF8Q9UPN6 MTCO1P9-201ENST00000505577 1534 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms