Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC006077.1-201ENST00000604746 343 ntBASIC2.91□□□□□ -1.94
NOTCH3Q9UM47 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.91□□□□□ -1.94
NOTCH3Q9UM47 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.91□□□□□ -1.94
NOTCH3Q9UM47 MIR7702-201ENST00000621931 59 ntBASIC2.91□□□□□ -1.94
NOTCH3Q9UM47 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NOTCH3Q9UM47 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
NOTCH3Q9UM47 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NOTCH3Q9UM47 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.94
NOTCH3Q9UM47 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC2.9□□□□□ -1.94
NOTCH3Q9UM47 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC092447.10-201ENST00000620607 1652 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 RNU6-1339P-201ENST00000363574 91 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 MIR1-2-201ENST00000384961 85 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 MIR548F4-201ENST00000408515 105 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 RNU6-1148P-201ENST00000410992 104 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 RNU2-64P-201ENST00000411315 191 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AL035423.1-201ENST00000420331 213 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 OR51AB1P-201ENST00000429046 620 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 RN7SL271P-201ENST00000487601 295 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC106872.3-201ENST00000495104 446 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 PCBP2P3-201ENST00000509726 843 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC114797.1-201ENST00000514003 728 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 SUB1P2-201ENST00000556401 297 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 HMGB1P6-201ENST00000569046 646 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AL596327.1-201ENST00000603629 213 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AP000542.2-201ENST00000623199 6179 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 Y_RNA.476-201ENST00000384347 108 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 RNU6-809P-201ENST00000384461 107 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 MTATP6P18-201ENST00000417994 673 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 SKP1P1-201ENST00000438081 489 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 RPL23AP89-201ENST00000439324 255 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 RN7SL504P-201ENST00000494496 287 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC111193.1-201ENST00000504097 155 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 Y_RNA.720-201ENST00000517166 92 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 IGLV3-26-201ENST00000520756 302 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC022634.1-201ENST00000520765 532 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AP000889.2-201ENST00000532684 490 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 APOOP3-201ENST00000536787 586 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC007458.1-201ENST00000542812 373 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AL163153.1-201ENST00000554223 283 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 OR4T1P-201ENST00000554933 911 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 MIR544B-201ENST00000582372 78 ntBASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NOTCH3Q9UM47 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 MTND5P27-201ENST00000428871 1720 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 RNU6-108P-201ENST00000365558 107 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 MIR513A2-201ENST00000385249 127 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 RNU2-9P-201ENST00000410194 145 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC008267.5-201ENST00000424928 265 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC009965.2-201ENST00000425328 970 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 FAM103A2P-201ENST00000444122 354 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 CYCSP35-201ENST00000451978 304 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 EIF4EP3-201ENST00000498782 656 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 RPL38P4-201ENST00000502376 214 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC005741.1-201ENST00000511094 432 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 Y_RNA.691-201ENST00000516611 103 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 RANP9-201ENST00000519957 271 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AP001189.2-201ENST00000527320 189 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC069240.1-201ENST00000548774 375 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AL389895.1-201ENST00000554127 252 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC007375.1-201ENST00000554513 578 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 CYCSP2-201ENST00000558168 301 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC006270.2-201ENST00000578523 652 ntBASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.89□□□□□ -1.95
NOTCH3Q9UM47 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms