Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-953P-201ENST00000459154 107 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 RPL7AP28-201ENST00000464513 571 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC026782.1-201ENST00000512952 449 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 RN7SKP276-201ENST00000516242 268 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC009902.1-201ENST00000519351 183 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 RN7SL690P-201ENST00000582087 240 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AL590392.1-201ENST00000604960 446 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 SNORD91B-202ENST00000608459 222 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC015914.2-201ENST00000618167 288 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC027290.2-201ENST00000623210 18662 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 MTND5P30-201ENST00000452896 1731 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 PRO1804-201ENST00000623780 2050 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 RNU1-94P-201ENST00000362627 173 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 Y_RNA.158-201ENST00000363651 101 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 Y_RNA.252-201ENST00000364556 101 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-1032P-201ENST00000384100 107 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 MIR23B-201ENST00000384832 97 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 SNORA48.7-201ENST00000391302 135 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AL139039.1-201ENST00000401900 692 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 RPS12P24-201ENST00000412619 387 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AF186996.5-201ENST00000418098 904 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AL160275.3-201ENST00000423876 471 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 NRBF2P3-201ENST00000432731 865 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 SNRPEP4-201ENST00000435815 279 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 RPL35AP21-201ENST00000437667 333 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 HIGD1AP11-201ENST00000438361 280 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 RN7SL814P-201ENST00000487715 300 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 MRPS33P2-201ENST00000507850 322 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AL117187.1-201ENST00000555482 181 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AC018462.2-201ENST00000605375 395 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AL121655.1-201ENST00000605811 308 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 MIR6128-201ENST00000615528 109 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 ATP5A1P2-202ENST00000616464 443 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AC099669.2-201ENST00000616549 437 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 AL132822.1-201ENST00000617063 513 ntBASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDC42EP3Q9UKI2 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.09□□□□□ -1.76
CDC42EP3Q9UKI2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.09□□□□□ -1.76
CDC42EP3Q9UKI2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.09□□□□□ -1.76
CDC42EP3Q9UKI2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDC42EP3Q9UKI2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 Y_RNA.463-201ENST00000384271 102 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-45P-201ENST00000384471 107 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-95P-201ENST00000384697 107 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC080125.1-201ENST00000414888 684 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 MCFD2P1-201ENST00000417812 300 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AL590632.1-201ENST00000424289 371 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AL359672.1-201ENST00000442302 409 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms