Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 ISCA1P3-201ENST00000577104 373 ntBASIC3.19□□□□□ -1.9
SALL1Q9NSC2 AL353778.1-201ENST00000603149 408 ntBASIC3.19□□□□□ -1.9
SALL1Q9NSC2 AC068313.1-201ENST00000604028 1008 ntBASIC3.19□□□□□ -1.9
SALL1Q9NSC2 AL360219.1-201ENST00000610230 366 ntBASIC3.19□□□□□ -1.9
SALL1Q9NSC2 AC073968.1-201ENST00000618594 637 ntBASIC3.19□□□□□ -1.9
SALL1Q9NSC2 AC131159.1-201ENST00000621854 213 ntBASIC3.19□□□□□ -1.9
SALL1Q9NSC2 CR381572.1-201ENST00000625098 102 ntBASIC3.19□□□□□ -1.9
SALL1Q9NSC2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AP002907.1-201ENST00000606361 1430 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 SNORA4.1-201ENST00000364263 144 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 RNU6-1200P-201ENST00000384162 107 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 RNU6-339P-201ENST00000384310 107 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 NPM1P11-201ENST00000417106 855 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 YPEL5P1-201ENST00000419731 367 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 MTND4P20-201ENST00000424125 869 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 MTND5P2-201ENST00000442927 1142 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 GSTA11P-201ENST00000452866 669 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 RPL7P5-201ENST00000471472 736 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC128713.1-201ENST00000471495 306 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 LINC00888-204ENST00000487386 421 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 RPS3AP22-201ENST00000488297 769 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 TMEM251P1-201ENST00000503717 318 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC093281.2-201ENST00000510153 597 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 RNA5SP148-201ENST00000516527 94 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC243972.3-201ENST00000539655 198 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AL163153.1-201ENST00000554223 283 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC091544.4-201ENST00000555268 342 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 CYCSP2-201ENST00000558168 301 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC106791.2-201ENST00000604680 391 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AL390240.1-201ENST00000612950 384 ntBASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SALL1Q9NSC2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SALL1Q9NSC2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SALL1Q9NSC2 NUP58P1-201ENST00000502546 1738 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SALL1Q9NSC2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SALL1Q9NSC2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SALL1Q9NSC2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SALL1Q9NSC2 SNORD82-201ENST00000365530 70 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 DEFB109C-201ENST00000382575 264 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 DEFB109B-201ENST00000382656 264 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 RNU6-878P-201ENST00000384578 110 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 RPLP0P7-201ENST00000416050 667 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SALL1Q9NSC2 FNDC3CP-201ENST00000420795 1155 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 AL022400.1-201ENST00000423946 935 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 SRIP2-201ENST00000428470 166 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 ARPC3P5-201ENST00000448802 534 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 ARPC3P2-201ENST00000457786 533 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 MTND1P22-201ENST00000510572 951 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 MRPS33P3-201ENST00000513456 322 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.17□□□□□ -1.9
SALL1Q9NSC2 AC109329.2-201ENST00000519658 482 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.17□□□□□ -1.9
SALL1Q9NSC2 MIR4635-201ENST00000583759 79 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 AP001029.3-201ENST00000588063 596 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 AL596327.1-201ENST00000603629 213 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 AC025588.4-201ENST00000615802 908 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 AC103706.2-201ENST00000638080 240 ntBASIC3.17□□□□□ -1.9
SALL1Q9NSC2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 SNORA70B-201ENST00000384210 135 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 RNY3P9-201ENST00000384727 106 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 AL590084.2-201ENST00000401481 382 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 RAD23BP2-201ENST00000416003 1207 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 TOMM22P1-201ENST00000418578 312 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 MUPP-201ENST00000438111 566 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 AC091179.1-201ENST00000461606 579 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 AC010285.1-201ENST00000470580 392 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 RPS20P22-201ENST00000473700 357 ntBASIC3.16□□□□□ -1.9
SALL1Q9NSC2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.16□□□□□ -1.9
SALL1Q9NSC2 HSPE1P23-201ENST00000509838 286 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms