Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RNU1-14P-201ENST00000362759 152 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RNU6-1252P-201ENST00000363054 104 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RNU1-20P-201ENST00000363314 162 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RNU6-179P-201ENST00000363350 107 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 Y_RNA.167-201ENST00000363735 109 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RNA5SP175-201ENST00000364275 119 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 UBE2V1P2-201ENST00000397758 440 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AL356057.3-201ENST00000402607 340 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 SNORA11.2-201ENST00000408318 127 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RNA5SP36-201ENST00000410197 133 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RNU2-36P-201ENST00000410361 191 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RPL37P10-201ENST00000412884 288 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC074085.1-201ENST00000413598 418 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC093578.1-201ENST00000415219 368 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC108032.1-201ENST00000416706 207 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 EZH2P1-201ENST00000431167 291 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RPL32P28-201ENST00000443577 397 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC020550.1-201ENST00000447385 163 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 MRPS31P2-201ENST00000451581 518 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RNA5SP103-201ENST00000459503 118 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 DEFB109F-201ENST00000491870 277 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 CCDC34P1-201ENST00000507441 517 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 COPS8P3-201ENST00000526024 482 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AL133153.1-201ENST00000557756 303 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 HSPE1P5-201ENST00000561489 272 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC100830.2-201ENST00000581636 240 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 RNA5SP108-201ENST00000605921 117 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AL390240.1-201ENST00000612950 384 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 AC091953.5-201ENST00000622919 233 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 FAM91A3P-201ENST00000456826 2544 ntBASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM7Q9NR12 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 Y_RNA.133-201ENST00000363428 110 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 Y_RNA.187-201ENST00000363918 113 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 RNU6-574P-201ENST00000384265 107 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 SNORD66.1-201ENST00000391230 76 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AL136372.1-201ENST00000403060 228 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 PMCHL1-202ENST00000423102 261 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 RPL23AP33-201ENST00000442301 452 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 RPL23AP81-201ENST00000455252 467 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 SCARNA13-201ENST00000516672 275 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 FAM60DP-201ENST00000524174 632 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AP000889.2-201ENST00000532684 490 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AP000763.2-201ENST00000540641 163 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 SNRPGP18-201ENST00000553000 214 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AL132822.1-201ENST00000617063 513 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 7SK.10-201ENST00000621414 298 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 uc_338.22-201ENST00000622722 187 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 AC008013.2-202ENST00000637965 364 ntBASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM7Q9NR12 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 AC126323.6-202ENST00000568092 3511 ntBASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM7Q9NR12 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms