Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 RNU4-42P-201ENST00000364738 142 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 RNU6-806P-201ENST00000365147 105 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 Y_RNA.350-201ENST00000365409 98 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 RNU6-209P-201ENST00000384118 107 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 Y_RNA.461-201ENST00000384263 103 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 RNU4-78P-201ENST00000410940 126 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 RNU4-61P-201ENST00000411243 107 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 RPL21P90-201ENST00000415692 466 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 RN7SL222P-201ENST00000476452 299 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 AC108860.1-201ENST00000484521 383 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 PPIAP19-201ENST00000486414 492 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 RPL17P19-201ENST00000489069 552 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 MTND3P25-201ENST00000509243 135 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 SNORA40.14-201ENST00000516543 86 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 SNORA31.22-201ENST00000517204 135 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 AP003385.6-201ENST00000531603 374 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 OR4H12P-201ENST00000556269 907 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 AC008669.1-201ENST00000565823 2178 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 MIR3128-201ENST00000581957 66 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 HMGN2P28-201ENST00000606102 262 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 AC015967.1-201ENST00000619893 476 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 CR381572.2-201ENST00000624852 397 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.76□□□□□ -1.65
SSU72Q9NP77 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSU72Q9NP77 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SSU72Q9NP77 TLK1P1-201ENST00000456760 2440 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSU72Q9NP77 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSU72Q9NP77 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 Y_RNA.48-201ENST00000362710 103 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 RNY3P11-201ENST00000364153 102 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 RNU6-596P-201ENST00000365395 98 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 Y_RNA.376-201ENST00000365638 108 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 Y_RNA.480-201ENST00000384364 102 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 MIR578-201ENST00000384828 96 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AL138885.1-201ENST00000405921 675 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 RNU6-1156P-201ENST00000410365 100 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 RPL7L1P9-201ENST00000431298 745 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 RPL34P20-201ENST00000442771 351 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 HMGN1P2-201ENST00000445197 310 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 RPS11P1-201ENST00000451072 473 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC092647.2-201ENST00000452998 253 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 RN7SL214P-201ENST00000487317 265 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC011005.2-201ENST00000487324 359 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 RN7SL184P-201ENST00000488308 297 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 RN7SL244P-201ENST00000493405 297 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC083829.1-201ENST00000503756 657 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC040926.1-201ENST00000530195 238 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AP000889.1-201ENST00000530968 660 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC007375.1-201ENST00000554513 578 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC093249.4-201ENST00000564755 259 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 RPL23AP87-202ENST00000573039 466 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 MIR4512-201ENST00000583257 77 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 RNU6-85P-201ENST00000605989 107 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSU72Q9NP77 MIR6071-201ENST00000616741 78 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms