Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC010200.2-201ENST00000605098 235 ntBASIC1.08□□□□□ -2.24
CDH23Q9H251 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CDH23Q9H251 RPL30P4-201ENST00000429309 333 ntBASIC1.08□□□□□ -2.24
CDH23Q9H251 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.08□□□□□ -2.24
CDH23Q9H251 AC093281.2-201ENST00000510153 597 ntBASIC1.08□□□□□ -2.24
CDH23Q9H251 SNRPEP3-201ENST00000338402 276 ntBASIC1.07□□□□□ -2.24
CDH23Q9H251 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH23Q9H251 MIR1197-201ENST00000408818 88 ntBASIC1.07□□□□□ -2.24
CDH23Q9H251 OR51A5P-201ENST00000415429 942 ntBASIC1.07□□□□□ -2.24
CDH23Q9H251 AC103833.1-201ENST00000517442 172 ntBASIC1.07□□□□□ -2.24
CDH23Q9H251 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
CDH23Q9H251 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CDH23Q9H251 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CDH23Q9H251 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.07□□□□□ -2.24
CDH23Q9H251 USP9YP33-201ENST00000412220 421 ntBASIC1.07□□□□□ -2.24
CDH23Q9H251 USP9YP35-201ENST00000435696 412 ntBASIC1.07□□□□□ -2.24
CDH23Q9H251 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CDH23Q9H251 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.06□□□□□ -2.24
CDH23Q9H251 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.06□□□□□ -2.24
CDH23Q9H251 AC009229.3-201ENST00000608056 282 ntBASIC1.06□□□□□ -2.24
CDH23Q9H251 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.06□□□□□ -2.24
CDH23Q9H251 FCF1P2-201ENST00000415284 583 ntBASIC1.06□□□□□ -2.24
CDH23Q9H251 RPL31P63-201ENST00000422565 375 ntBASIC1.06□□□□□ -2.24
CDH23Q9H251 RNA5SP233-201ENST00000459153 113 ntBASIC1.06□□□□□ -2.24
CDH23Q9H251 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.06□□□□□ -2.24
CDH23Q9H251 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
CDH23Q9H251 MTCO1P40-201ENST00000574371 625 ntBASIC1.06□□□□□ -2.24
CDH23Q9H251 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
CDH23Q9H251 RNU11-5P-201ENST00000391216 129 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.05□□□□□ -2.24
CDH23Q9H251 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.05□□□□□ -2.24
CDH23Q9H251 RPL31P58-201ENST00000469001 379 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 AC121761.2-201ENST00000617300 689 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 AC130650.2-201ENST00000618736 2403 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.05□□□□□ -2.24
CDH23Q9H251 HMGB1P49-201ENST00000418882 569 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 RNA5SP364-201ENST00000516938 78 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 SNORA31.26-201ENST00000517250 137 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 RNA5SP193-201ENST00000410353 107 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.05□□□□□ -2.24
CDH23Q9H251 AC006270.3-201ENST00000605967 1036 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 MIR924-201ENST00000638017 53 ntBASIC1.05□□□□□ -2.24
CDH23Q9H251 MIR936-201ENST00000401264 98 ntBASIC1.04□□□□□ -2.24
CDH23Q9H251 AL162388.1-201ENST00000450912 352 ntBASIC1.04□□□□□ -2.24
CDH23Q9H251 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.04□□□□□ -2.24
CDH23Q9H251 AL354685.2-201ENST00000448218 1447 ntBASIC1.04□□□□□ -2.24
CDH23Q9H251 RPL5P19-201ENST00000404228 893 ntBASIC1.04□□□□□ -2.24
CDH23Q9H251 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.04□□□□□ -2.24
CDH23Q9H251 AP000949.1-201ENST00000438328 629 ntBASIC1.04□□□□□ -2.24
CDH23Q9H251 OR51B8P-201ENST00000449892 769 ntBASIC1.04□□□□□ -2.24
CDH23Q9H251 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.04□□□□□ -2.24
CDH23Q9H251 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CDH23Q9H251 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
CDH23Q9H251 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
CDH23Q9H251 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDH23Q9H251 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
CDH23Q9H251 MRPS36P1-201ENST00000421291 307 ntBASIC1.03□□□□□ -2.24
CDH23Q9H251 AL121871.1-201ENST00000443413 436 ntBASIC1.03□□□□□ -2.24
CDH23Q9H251 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH23Q9H251 AC114786.4-201ENST00000508771 728 ntBASIC1.03□□□□□ -2.24
CDH23Q9H251 AC114797.1-201ENST00000514003 728 ntBASIC1.03□□□□□ -2.24
CDH23Q9H251 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH23Q9H251 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH23Q9H251 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDH23Q9H251 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDH23Q9H251 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH23Q9H251 RPS6P12-201ENST00000432491 726 ntBASIC1.03□□□□□ -2.24
CDH23Q9H251 ZNF965P-201ENST00000432501 817 ntBASIC1.03□□□□□ -2.24
CDH23Q9H251 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.03□□□□□ -2.24
CDH23Q9H251 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.03□□□□□ -2.25
CDH23Q9H251 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
CDH23Q9H251 Y_RNA.518-201ENST00000384552 113 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 OR6C7P-201ENST00000547875 934 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 DUXAP3-201ENST00000603616 594 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 AP003499.2-201ENST00000624100 483 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 Y_RNA.280-201ENST00000364765 112 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 NUP35P2-201ENST00000416748 943 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.02□□□□□ -2.25
CDH23Q9H251 PSMA2P3-201ENST00000429685 675 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.02□□□□□ -2.25
CDH23Q9H251 GDI2P2-201ENST00000445131 608 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.02□□□□□ -2.25
CDH23Q9H251 RPS15AP34-201ENST00000487776 387 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 AC092140.2-201ENST00000618027 521 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 MTND4P12-201ENST00000498999 1377 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
CDH23Q9H251 RNU6-222P-201ENST00000362438 107 ntBASIC1.02□□□□□ -2.25
CDH23Q9H251 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CDH23Q9H251 RNU6-17P-201ENST00000384245 107 ntBASIC1.01□□□□□ -2.25
CDH23Q9H251 RNU6-18P-201ENST00000384527 107 ntBASIC1.01□□□□□ -2.25
CDH23Q9H251 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.01□□□□□ -2.25
CDH23Q9H251 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.01□□□□□ -2.25
CDH23Q9H251 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.01□□□□□ -2.25
CDH23Q9H251 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.01□□□□□ -2.25
CDH23Q9H251 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.01□□□□□ -2.25
CDH23Q9H251 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CDH23Q9H251 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.01□□□□□ -2.25
CDH23Q9H251 AC074117.2-201ENST00000417130 397 ntBASIC1.01□□□□□ -2.25
CDH23Q9H251 AC000111.3-201ENST00000433478 193 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms