Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC245008.1-201ENST00000608123 476 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.77□□□□□ -1.81
USP44Q9H0E7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP44Q9H0E7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP44Q9H0E7 AL138713.1-201ENST00000624026 2130 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 AC090740.1-201ENST00000623193 2262 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
USP44Q9H0E7 RNU5F-6P-201ENST00000362979 116 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 RNU6-805P-201ENST00000365643 106 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
USP44Q9H0E7 DEFB109C-201ENST00000382575 264 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 DEFB109B-201ENST00000382656 264 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 RNU6-76P-201ENST00000384060 104 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 HMGB3P23-201ENST00000414981 585 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 SEPT2P1-201ENST00000419651 180 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 AL159169.1-201ENST00000421119 127 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 MTATP6P4-201ENST00000427725 675 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 AC244035.1-201ENST00000430042 390 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 EPS15P1-201ENST00000448836 336 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 AL136097.1-201ENST00000456945 913 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 RPL23AP62-201ENST00000463396 453 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.76□□□□□ -1.81
USP44Q9H0E7 RPS29P26-201ENST00000477483 171 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 AC080014.1-201ENST00000496877 1201 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 AC025881.1-201ENST00000518851 512 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 HIGD1AP10-201ENST00000527837 282 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.76□□□□□ -1.81
USP44Q9H0E7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.76□□□□□ -1.81
USP44Q9H0E7 OR10AB1P-201ENST00000609613 938 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 AL450472.3-201ENST00000615578 367 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 Z69908.1-201ENST00000622603 247 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.76□□□□□ -1.81
USP44Q9H0E7 AC118273.1-201ENST00000525324 3006 ntBASIC3.76□□□□□ -1.81
USP44Q9H0E7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP44Q9H0E7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP44Q9H0E7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP44Q9H0E7 PABPC1P9-201ENST00000426076 1612 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 RNU4-21P-201ENST00000362802 126 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 RNU6-432P-201ENST00000384196 109 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 MIR23A-201ENST00000385245 73 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 OR2AS1P-201ENST00000427827 319 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC024082.2-201ENST00000434771 238 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC129850.1-201ENST00000436203 508 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 KATNBL1P3-201ENST00000443475 909 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 HMGN2P16-201ENST00000456802 261 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 RPL31P3-201ENST00000458430 332 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 RNA5SP269-201ENST00000459032 137 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 RNU7-59P-201ENST00000459101 61 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC068724.1-201ENST00000487100 792 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP44Q9H0E7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 AL359273.1-201ENST00000510918 627 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 RN7SKP289-201ENST00000517244 295 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 MED28P6-201ENST00000558776 231 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AP005205.1-201ENST00000563503 508 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 ACTR3BP3-201ENST00000565577 979 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 RPL23AP84-201ENST00000571193 464 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 COX6CP3-201ENST00000580869 223 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 BDH2P1-201ENST00000602288 736 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AP001330.4-201ENST00000604350 154 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AL031775.1-201ENST00000607014 887 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC135507.1-201ENST00000607214 561 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC073114.1-201ENST00000612027 490 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC108479.2-201ENST00000617314 601 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.75□□□□□ -1.81
USP44Q9H0E7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP44Q9H0E7 AC010733.2-201ENST00000589496 5702 ntBASIC3.75□□□□□ -1.81
USP44Q9H0E7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP44Q9H0E7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP44Q9H0E7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP44Q9H0E7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 SNORA46-201ENST00000384762 135 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 RNU6-328P-201ENST00000390887 106 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 RPS3AP24-201ENST00000407896 734 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AC009237.5-201ENST00000414271 501 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 PPP1R11P2-201ENST00000423543 382 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AL353777.1-201ENST00000425552 326 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 OR4K11P-201ENST00000431829 904 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 RPL22P17-201ENST00000438729 315 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 TRIM60P18-201ENST00000441518 828 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AL592447.1-201ENST00000447592 540 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.74□□□□□ -1.81
USP44Q9H0E7 AC125238.1-201ENST00000448842 249 ntBASIC3.74□□□□□ -1.81
USP44Q9H0E7 MTCO1P42-201ENST00000457379 726 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms