Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MRPS21P8-201ENST00000569196 235 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 RN7SL475P-201ENST00000583379 298 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 AC023043.4-201ENST00000612081 449 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 MIR6861-201ENST00000618657 64 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 Y_RNA.778-201ENST00000620203 90 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 AC024884.1-201ENST00000620583 399 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USB1Q9BQ65 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USB1Q9BQ65 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USB1Q9BQ65 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
USB1Q9BQ65 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
USB1Q9BQ65 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 Y_RNA.7-201ENST00000362352 102 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 Y_RNA.23-201ENST00000362496 106 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 RNU6-151P-201ENST00000364158 107 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 RNU6-211P-201ENST00000384047 107 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 MIR569-201ENST00000385228 96 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 SNORA40.19-201ENST00000390846 128 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 RPL35AP31-201ENST00000418340 337 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 RPL12P46-201ENST00000436610 195 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 IFNA11P-201ENST00000446352 526 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 AC092798.1-201ENST00000458542 409 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 AC005840.1-201ENST00000498412 377 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 AC024940.3-201ENST00000538551 316 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 MIR5695-201ENST00000579717 85 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 AL138895.2-201ENST00000603019 178 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 AL353743.1-202ENST00000431724 1695 ntBASIC5.43□□□□□ -1.54
USB1Q9BQ65 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
USB1Q9BQ65 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USB1Q9BQ65 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 RNU1-134P-201ENST00000362935 165 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 RNU6-105P-201ENST00000363909 104 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 SNORD8-201ENST00000363915 110 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 SNORA51.9-201ENST00000384295 124 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 MIR433-201ENST00000384837 93 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 SEPT7P4-201ENST00000437076 306 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 AL078601.1-201ENST00000444542 271 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 AC098847.1-201ENST00000473094 348 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 RPS20P22-201ENST00000473700 357 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 AC022795.1-201ENST00000473808 480 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 AF186996.7-201ENST00000492781 209 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 AC139453.3-201ENST00000493276 369 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 BTF3L4P4-201ENST00000506381 449 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 RNA5SP434-201ENST00000516647 121 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 RNU6-572P-201ENST00000516724 80 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 RNA5SP290-201ENST00000517133 127 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 TGIF1P1-201ENST00000558095 802 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 FKBP1AP1-201ENST00000594588 318 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 AC006272.2-201ENST00000594725 163 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.42□□□□□ -1.54
USB1Q9BQ65 snoU18.1-201ENST00000629629 71 ntBASIC5.42□□□□□ -1.54
USB1Q9BQ65 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USB1Q9BQ65 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms