Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
VRK1Q99986 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VRK1Q99986 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
VRK1Q99986 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VRK1Q99986 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VRK1Q99986 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VRK1Q99986 RNA5SP447-201ENST00000363749 119 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 RNU6-82P-201ENST00000363970 107 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 U3.12-201ENST00000364498 214 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 RNA5SP167-201ENST00000365461 116 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 MIR93-201ENST00000385024 80 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 AL590762.2-201ENST00000395798 571 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 AL592114.1-201ENST00000403842 483 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 RNA5SP239-201ENST00000410218 129 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 Y_RNA.615-201ENST00000410769 117 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.95□□□□□ -1.78
VRK1Q99986 AL645937.1-202ENST00000421799 937 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 RPL27AP8-201ENST00000424277 446 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 RPL35AP12-201ENST00000425362 338 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 RPL18P10-201ENST00000425606 538 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.95□□□□□ -1.78
VRK1Q99986 HMGB1P27-201ENST00000431429 603 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.95□□□□□ -1.78
VRK1Q99986 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.95□□□□□ -1.78
VRK1Q99986 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VRK1Q99986 RPL7P12-201ENST00000446719 750 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 AC007547.1-201ENST00000462177 490 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 RN7SL385P-201ENST00000468873 276 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 TRBV1-201ENST00000476502 284 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 MTND3P22-201ENST00000510932 243 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.95□□□□□ -1.78
VRK1Q99986 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.95□□□□□ -1.78
VRK1Q99986 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.95□□□□□ -1.78
VRK1Q99986 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.95□□□□□ -1.78
VRK1Q99986 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.95□□□□□ -1.78
VRK1Q99986 SCARNA15.2-201ENST00000516409 127 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 RNU6-1314P-201ENST00000517139 104 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.95□□□□□ -1.78
VRK1Q99986 AC069240.1-201ENST00000548774 375 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.95□□□□□ -1.78
VRK1Q99986 ZFRP1-201ENST00000457579 2970 ntBASIC3.95□□□□□ -1.78
VRK1Q99986 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.95□□□□□ -1.78
VRK1Q99986 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VRK1Q99986 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK1Q99986 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK1Q99986 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK1Q99986 MTND4P35-201ENST00000604257 1375 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.94□□□□□ -1.78
VRK1Q99986 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK1Q99986 Y_RNA.142-201ENST00000363491 102 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 RNU6-522P-201ENST00000364497 107 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 RHOT1P2-201ENST00000366423 333 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 MIR129-1-201ENST00000384972 72 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 U3.22-201ENST00000391120 215 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 RPL32P23-201ENST00000397237 405 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 RN7SKP32-201ENST00000410167 303 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 RN7SKP177-201ENST00000410567 355 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 NDUFB4P7-201ENST00000423198 363 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.94□□□□□ -1.78
VRK1Q99986 RPEP3-201ENST00000425462 676 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 RPL21P66-201ENST00000426566 466 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 RPL23AP25-201ENST00000430973 463 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 AL591704.1-201ENST00000432574 275 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 AC093019.1-201ENST00000443135 252 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 PRDX3P3-201ENST00000447765 522 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 AC116533.1-201ENST00000459748 321 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 RPL36AP41-201ENST00000493820 306 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK1Q99986 AC006499.6-201ENST00000511169 607 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VRK1Q99986 Y_RNA.665-201ENST00000516177 98 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 IGLVIV-65-201ENST00000517313 360 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 NARSP2-201ENST00000518524 679 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.94□□□□□ -1.78
VRK1Q99986 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.94□□□□□ -1.78
VRK1Q99986 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.94□□□□□ -1.78
VRK1Q99986 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.94□□□□□ -1.78
VRK1Q99986 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK1Q99986 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.94□□□□□ -1.78
VRK1Q99986 AC020634.1-201ENST00000608701 549 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 AP002826.1-201ENST00000608835 315 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK1Q99986 AC009248.2-201ENST00000619826 254 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK1Q99986 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VRK1Q99986 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK1Q99986 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VRK1Q99986 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK1Q99986 MFSD8-242ENST00000641690 4199 ntBASIC3.94□□□□□ -1.78
VRK1Q99986 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK1Q99986 AC121333.1-201ENST00000567488 2709 ntBASIC3.93□□□□□ -1.78
VRK1Q99986 AC073544.1-201ENST00000600110 1595 ntBASIC3.93□□□□□ -1.78
VRK1Q99986 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK1Q99986 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK1Q99986 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK1Q99986 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK1Q99986 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VRK1Q99986 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK1Q99986 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VRK1Q99986 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms