Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CPNE1Q99829 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CPNE1Q99829 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CPNE1Q99829 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPNE1Q99829 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPNE1Q99829 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CPNE1Q99829 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 SNORA1.3-201ENST00000384676 136 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 RPS4XP3-201ENST00000398541 413 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 USP12PX-201ENST00000432383 1057 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 AC005019.1-201ENST00000436455 431 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 AC005094.1-201ENST00000440420 368 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 USP9YP12-201ENST00000450481 570 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 RPS27AP8-201ENST00000452665 445 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 RN7SL75P-201ENST00000461926 281 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 RPL30P5-201ENST00000494923 336 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CPNE1Q99829 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.16□□□□□ -1.9
CPNE1Q99829 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 FABP5P5-201ENST00000515537 406 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 RNU6-1256P-201ENST00000516539 103 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 Y_RNA.688-201ENST00000516565 95 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 AC100870.1-201ENST00000522035 505 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
CPNE1Q99829 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.16□□□□□ -1.9
CPNE1Q99829 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 RPL21P12-201ENST00000559810 515 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 AC005951.2-201ENST00000576282 495 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 MIR3146-201ENST00000580367 79 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 AC138749.5-201ENST00000611461 208 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.16□□□□□ -1.9
CPNE1Q99829 AC116165.2-201ENST00000616705 206 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 AC068057.2-201ENST00000624047 895 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CPNE1Q99829 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPNE1Q99829 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
CPNE1Q99829 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CPNE1Q99829 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CPNE1Q99829 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CPNE1Q99829 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
CPNE1Q99829 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CPNE1Q99829 SNORA48.8-201ENST00000391324 134 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 USP9YP13-201ENST00000417797 480 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.15□□□□□ -1.91
CPNE1Q99829 AL356583.2-201ENST00000426536 280 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AC091286.1-201ENST00000431233 461 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AL353705.1-201ENST00000433468 480 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 TAAR7P-201ENST00000436141 242 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.15□□□□□ -1.91
CPNE1Q99829 AC009237.8-201ENST00000445492 379 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CPNE1Q99829 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.15□□□□□ -1.91
CPNE1Q99829 RNU6-64P-201ENST00000517119 105 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.15□□□□□ -1.91
CPNE1Q99829 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.15□□□□□ -1.91
CPNE1Q99829 AC022878.1-201ENST00000530684 149 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.15□□□□□ -1.91
CPNE1Q99829 AC123904.3-201ENST00000547218 814 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.15□□□□□ -1.91
CPNE1Q99829 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.15□□□□□ -1.91
CPNE1Q99829 AC112191.3-201ENST00000604371 277 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AC004696.1-201ENST00000614345 607 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 SNHG22-203ENST00000617833 660 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AC092140.2-201ENST00000618027 521 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AC009878.1-201ENST00000621819 340 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 AC025048.6-202ENST00000627667 438 ntBASIC3.15□□□□□ -1.91
CPNE1Q99829 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CPNE1Q99829 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CPNE1Q99829 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.15□□□□□ -1.91
CPNE1Q99829 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CPNE1Q99829 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CPNE1Q99829 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.14□□□□□ -1.91
CPNE1Q99829 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CPNE1Q99829 OR1S2-201ENST00000302592 978 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 RNU1-33P-201ENST00000364249 162 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CPNE1Q99829 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CPNE1Q99829 FCF1P10-201ENST00000407590 479 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 Y_RNA.598-201ENST00000410480 95 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 RN7SKP140-201ENST00000411196 284 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.14□□□□□ -1.91
CPNE1Q99829 AC244035.1-201ENST00000430042 390 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 HMGN2P31-201ENST00000432430 273 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 AC129850.1-201ENST00000436203 508 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.14□□□□□ -1.91
CPNE1Q99829 AL590664.1-201ENST00000448065 339 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.14□□□□□ -1.91
CPNE1Q99829 RN7SL542P-201ENST00000467147 294 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.14□□□□□ -1.91
CPNE1Q99829 OR5BM1P-201ENST00000512021 366 ntBASIC3.14□□□□□ -1.91
CPNE1Q99829 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms