Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC138649.3-201ENST00000622154 254 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC019226.1-201ENST00000625666 515 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX27Q96L92 OR5AK4P-201ENST00000635912 903 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC099654.12-201ENST00000639868 649 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX27Q96L92 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX27Q96L92 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX27Q96L92 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 AC027514.1-201ENST00000588561 1603 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 AL157700.1-201ENST00000561973 1432 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 RNY3P13-201ENST00000365542 102 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 RNU6-882P-201ENST00000391025 103 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 RNU6-754P-201ENST00000391166 107 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 RNU6-648P-201ENST00000410190 107 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX27Q96L92 RPL31P35-201ENST00000431058 377 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX27Q96L92 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX27Q96L92 AL513124.1-201ENST00000450410 614 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX27Q96L92 AP000873.1-201ENST00000463987 400 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 SRRM1P2-201ENST00000464531 1192 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 RPL9P33-201ENST00000484311 566 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 KCTD9P5-201ENST00000504141 1170 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 AC114967.1-201ENST00000504890 259 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 HMGN1P11-201ENST00000508668 303 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 AC104619.4-201ENST00000510773 249 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 RNA5SP445-201ENST00000515889 115 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 RNA5SP309-201ENST00000516670 106 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 Vault.3-201ENST00000516676 95 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX27Q96L92 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX27Q96L92 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX27Q96L92 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX27Q96L92 AC125611.2-201ENST00000551907 647 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX27Q96L92 AC010546.1-201ENST00000569391 485 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX27Q96L92 AC103710.3-201ENST00000608157 948 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 uc_338.12-201ENST00000616344 181 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 MIR6130-201ENST00000619419 109 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 AC243312.2-201ENST00000623340 601 ntBASIC4.07□□□□□ -1.76
SNX27Q96L92 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX27Q96L92 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX27Q96L92 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX27Q96L92 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX27Q96L92 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX27Q96L92 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX27Q96L92 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX27Q96L92 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX27Q96L92 RNU4-1-201ENST00000363925 141 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 RN7SKP226-201ENST00000364912 300 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 Y_RNA.296-201ENST00000364930 108 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX27Q96L92 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SNX27Q96L92 RNU6-1181P-201ENST00000384191 106 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 Y_RNA.516-201ENST00000384541 124 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 MIR504-201ENST00000385065 83 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 RNU6-328P-201ENST00000390887 106 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 RPL7P60-201ENST00000397636 735 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 RNU4-65P-201ENST00000410473 140 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 ELOCP17-201ENST00000414751 326 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 PIGFP2-201ENST00000421400 651 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 RPS3AP44-201ENST00000425466 790 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 AC004866.2-201ENST00000438285 481 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX27Q96L92 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 MTND1P12-201ENST00000455231 147 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 KLHL2P1-201ENST00000508691 521 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AC091133.4-201ENST00000511142 308 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AC021146.1-201ENST00000511202 716 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AC022483.1-201ENST00000514020 567 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 DEFB108A-201ENST00000530110 222 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX27Q96L92 AL451007.1-201ENST00000595491 289 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 MIR98-201ENST00000606724 119 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AC093838.1-201ENST00000613014 469 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 AC138649.5-201ENST00000637456 137 ntBASIC4.06□□□□□ -1.76
SNX27Q96L92 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX27Q96L92 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX27Q96L92 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX27Q96L92 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX27Q96L92 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms