Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPL23AP11-201ENST00000475260 469 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AC025445.1-201ENST00000502728 300 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 RN7SKP13-201ENST00000515933 244 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 RPL7P20-201ENST00000520308 745 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 MRPL49P2-201ENST00000521066 465 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 FAM60DP-201ENST00000524174 632 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AL118558.2-201ENST00000556294 238 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AC104237.2-201ENST00000612456 443 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AC093838.1-201ENST00000613014 469 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AC140479.6-201ENST00000633535 357 ntBASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHAMP1Q96JM3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 BDP1P-201ENST00000582658 1990 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 Y_RNA.100-201ENST00000363141 102 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 RN7SKP280-201ENST00000364196 304 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 RNU1-132P-201ENST00000364300 164 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 RNU4-66P-201ENST00000365199 138 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 RNU6-641P-201ENST00000384006 107 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 Y_RNA.431-201ENST00000384086 102 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 SNORD37.1-201ENST00000390968 65 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 RNU4-26P-201ENST00000410270 107 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 RNA5SP56-201ENST00000410277 118 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 HSPE1P1-201ENST00000421494 318 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 MTCO2P12-201ENST00000427426 682 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AL358472.1-201ENST00000431295 329 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AC006011.1-201ENST00000442758 349 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 MTND1P18-201ENST00000448191 573 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AC010655.1-201ENST00000449336 292 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AL162395.1-201ENST00000457882 422 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 SNORA59A-201ENST00000459326 152 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 RNU7-143P-201ENST00000516781 65 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AP005597.4-201ENST00000526762 229 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 OR8R1P-201ENST00000543943 764 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AC090948.1-201ENST00000607464 549 ntBASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHAMP1Q96JM3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 Y_RNA.162-201ENST00000363683 102 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 Y_RNA.301-201ENST00000364990 103 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 RNU11-4P-201ENST00000391149 133 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 UBE2V1P2-201ENST00000397758 440 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 AL590004.1-201ENST00000405321 300 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 AC114491.1-201ENST00000416095 246 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 RPL7P2-201ENST00000427639 268 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 AC007967.1-201ENST00000455422 1159 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 RPL36AP13-201ENST00000457490 317 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 RNU7-66P-201ENST00000459469 62 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 RPL7P49-201ENST00000471402 708 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 RNA5SP73-201ENST00000516744 108 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 RN7SKP116-201ENST00000516902 319 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 DEFB108D-201ENST00000527787 222 ntBASIC4.74□□□□□ -1.65
CHAMP1Q96JM3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms