Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 RNU6-173P-201ENST00000364215 104 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 Y_RNA.634-201ENST00000364811 113 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 Y_RNA.313-201ENST00000365095 103 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 U3.15-201ENST00000365398 212 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 SNORA51.8-201ENST00000384234 132 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 MYL6P3-201ENST00000436904 432 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 Z75741.1-201ENST00000446793 314 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 RPL12P39-201ENST00000455456 496 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 AC005921.1-201ENST00000510589 286 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 IGLC4-201ENST00000517690 248 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 5S_rRNA.11-201ENST00000618635 84 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 AC068205.3-201ENST00000636385 468 ntBASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.02□□□□□ -1.45
MS4A3Q96HJ5 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC007159.1-201ENST00000566529 4706 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 Y_RNA.111-201ENST00000363248 100 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 SNORD87-201ENST00000364849 89 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AL365496.1-201ENST00000426885 215 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC009244.1-201ENST00000450566 258 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 KC877373.1-201ENST00000479066 408 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC103975.1-201ENST00000482506 483 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 RNA5SP236-201ENST00000516169 116 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 RNU6-344P-201ENST00000516635 111 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 RNU6-703P-201ENST00000516946 107 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC007494.1-201ENST00000562293 760 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AC126915.2-201ENST00000610957 190 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 MIR6883-201ENST00000614952 78 ntBASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MS4A3Q96HJ5 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
MS4A3Q96HJ5 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
MS4A3Q96HJ5 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MS4A3Q96HJ5 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
MS4A3Q96HJ5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
MS4A3Q96HJ5 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MS4A3Q96HJ5 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MS4A3Q96HJ5 AL672296.1-201ENST00000427780 2158 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MS4A3Q96HJ5 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
MS4A3Q96HJ5 RN7SKP104-201ENST00000362605 328 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 Y_RNA.91-201ENST00000363042 107 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 RNU6-674P-201ENST00000363831 107 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 Y_RNA.198-201ENST00000364013 98 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 Y_RNA.290-201ENST00000364879 114 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 RNU6-979P-201ENST00000383896 107 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MS4A3Q96HJ5 AL136100.1-201ENST00000407696 330 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 AC007064.1-201ENST00000412238 351 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 RPL18AP14-201ENST00000417685 526 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 AL139281.1-201ENST00000422120 335 ntBASIC6□□□□□ -1.45
MS4A3Q96HJ5 AC099336.2-201ENST00000422457 254 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms