Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 DBF4P1-201ENST00000412976 1892 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 Y_RNA.112-201ENST00000363250 102 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 Y_RNA.187-201ENST00000363918 113 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 Y_RNA.301-201ENST00000364990 103 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 Y_RNA.307-201ENST00000365022 117 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 DEFB109C-201ENST00000382575 264 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 DEFB109B-201ENST00000382656 264 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 RNU1-44P-201ENST00000384453 163 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 MIR506-201ENST00000384998 124 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHFRQ96EP1 RNU4-6P-201ENST00000410804 122 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC073264.1-201ENST00000411508 416 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 RPL23AP46-201ENST00000438548 490 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AL136380.1-201ENST00000447970 162 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 HMGB3P22-202ENST00000451823 572 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 snoU13.22-201ENST00000459428 104 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC015724.1-201ENST00000478577 156 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC012158.1-204ENST00000483430 465 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 NARSP2-201ENST00000518524 679 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC022616.6-201ENST00000520479 119 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC008562.1-201ENST00000521763 330 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC022861.1-201ENST00000522981 663 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 AL389895.1-201ENST00000554127 252 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 MYL12BP1-201ENST00000569826 507 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AL606490.9-201ENST00000603331 271 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC025946.2-201ENST00000603398 234 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AP001521.1-201ENST00000609150 300 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC009318.4-201ENST00000620496 486 ntBASIC4.27□□□□□ -1.73
CHFRQ96EP1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHFRQ96EP1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHFRQ96EP1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.27□□□□□ -1.73
CHFRQ96EP1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHFRQ96EP1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC090337.1-201ENST00000579651 2074 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHFRQ96EP1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 RNA5SP124-201ENST00000362739 110 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 Y_RNA.255-201ENST00000364581 97 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 RNU6-169P-201ENST00000365336 107 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 MTCYBP4-201ENST00000401524 249 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHFRQ96EP1 BTBD10P2-201ENST00000404779 676 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 RNA5SP44-201ENST00000410446 133 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 RNU2-8P-201ENST00000410727 190 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 AL669831.1-202ENST00000428504 417 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 RPL23AP30-201ENST00000432419 501 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AL160004.2-201ENST00000432935 350 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 TBCAP1-201ENST00000436520 327 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC092809.1-201ENST00000441469 474 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 RPS7P5-201ENST00000441482 581 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 AL358232.1-201ENST00000448030 501 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 MRPS31P2-201ENST00000451581 518 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 Y_RNA.635-201ENST00000459041 101 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC007547.1-201ENST00000462177 490 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 RPS26P28-201ENST00000470806 348 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC106872.2-201ENST00000494303 480 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC108145.1-201ENST00000503770 153 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 RNU6-388P-201ENST00000517012 105 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 RNU6-389P-201ENST00000517048 105 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 MYL12AP1-201ENST00000518490 515 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 OR5B10P-201ENST00000532869 642 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 HMGB1P6-201ENST00000569046 646 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC099489.2-201ENST00000574976 260 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 CYP2C61P-201ENST00000604072 290 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 AC243773.3-201ENST00000613270 256 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 FAM157A-202ENST00000615155 405 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 uc_338.15-201ENST00000615470 191 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 MIR6500-201ENST00000622700 86 ntBASIC4.26□□□□□ -1.73
CHFRQ96EP1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHFRQ96EP1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
CHFRQ96EP1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms