Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 RNA5SP52-201ENST00000362448 134 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 Y_RNA.259-201ENST00000364619 101 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC110754.1-201ENST00000399740 601 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 RNU2-71P-201ENST00000411395 189 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 NDUFB4P5-201ENST00000415445 361 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC006480.1-201ENST00000449887 378 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 Y_RNA.631-201ENST00000459607 101 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 PARP1P2-201ENST00000556806 195 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 HMGB1P6-201ENST00000569046 646 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 MIR3690-201ENST00000580266 75 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC006023.2-201ENST00000609916 167 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 AC083809.1-201ENST00000615051 472 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 SNHG22-203ENST00000617833 660 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 OR4G1P-203ENST00000641984 1631 ntBASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP3Q96DZ5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC067945.1-201ENST00000342609 618 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 DEFB108F-201ENST00000344638 222 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 RNU6-511P-201ENST00000363496 107 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 RNU6-1284P-201ENST00000363701 100 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 SDHCP2-201ENST00000398565 501 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC018630.2-202ENST00000422992 927 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 RPL23AP30-201ENST00000432419 501 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 MTND4P17-201ENST00000470444 350 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 VN1R17P-201ENST00000472048 1090 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AL163540.1-201ENST00000485382 386 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC090096.1-201ENST00000489168 390 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC005741.1-201ENST00000511094 432 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 RNU6-1170P-201ENST00000515974 106 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 RNU2-10P-201ENST00000516375 211 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 RNU6-840P-201ENST00000517275 65 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC128657.1-201ENST00000549459 145 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 DNAJC8P1-201ENST00000554535 372 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 OR4H12P-201ENST00000556269 907 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC005668.1-201ENST00000571142 476 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 RPL23AP87-202ENST00000573039 466 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 7SK.10-201ENST00000621414 298 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 AL133216.2-202ENST00000634512 349 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 MAPK10-253ENST00000641010 4072 ntBASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP3Q96DZ5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.34□□□□□ -1.72
CLIP3Q96DZ5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CLIP3Q96DZ5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLIP3Q96DZ5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLIP3Q96DZ5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CLIP3Q96DZ5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP3Q96DZ5 NACAP2-201ENST00000318548 624 ntBASIC4.33□□□□□ -1.72
CLIP3Q96DZ5 RNU1-108P-201ENST00000362556 161 ntBASIC4.33□□□□□ -1.72
CLIP3Q96DZ5 RNU6-1097P-201ENST00000363586 107 ntBASIC4.33□□□□□ -1.72
CLIP3Q96DZ5 Y_RNA.202-201ENST00000364083 110 ntBASIC4.33□□□□□ -1.72
CLIP3Q96DZ5 Y_RNA.255-201ENST00000364581 97 ntBASIC4.33□□□□□ -1.72
CLIP3Q96DZ5 RNU6-574P-201ENST00000384265 107 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms