Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MED28P6-201ENST00000558776 231 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 MIR4293-201ENST00000584305 78 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC025165.5-201ENST00000602802 578 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC007684.1-201ENST00000609671 477 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC006023.2-201ENST00000609916 167 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC034229.5-201ENST00000624258 185 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 SEPT14P19-203ENST00000633205 211 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC068137.3-201ENST00000639191 341 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC073869.6-201ENST00000640656 341 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 OR5H6-203ENST00000642105 978 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 DEFB108F-201ENST00000344638 222 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 RNU6-1284P-201ENST00000363701 100 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 RNU6-282P-201ENST00000365357 103 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 RNU6-517P-201ENST00000384362 110 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 MIR200C-201ENST00000384980 68 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 RNA5SP424-201ENST00000390988 115 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC008850.1-201ENST00000427546 362 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 C8orf59P1-201ENST00000429930 303 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC091286.1-201ENST00000431233 461 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 USP12PX-201ENST00000432383 1057 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 GPR143P-201ENST00000434155 205 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 SNORA71B-202ENST00000439232 272 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 HMGN2P7-201ENST00000456186 273 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC104619.4-201ENST00000510773 249 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 SNORA31.8-201ENST00000516327 108 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 SUB1P2-201ENST00000556401 297 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AL136363.1-201ENST00000605349 337 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 U7.8-201ENST00000619968 63 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AL034408.1-202ENST00000636088 415 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 MIR6863-201ENST00000636112 90 ntBASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CHMP4CQ96CF2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 HSPE1P11-201ENST00000339579 310 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 RNU6-50P-201ENST00000362356 103 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 RNU6-511P-201ENST00000363496 107 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 RNU6-169P-201ENST00000365336 107 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 RNU6-456P-201ENST00000384493 107 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 FCF1P9-201ENST00000412546 282 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 CRYBB2P1-203ENST00000415709 538 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AL035423.1-201ENST00000420331 213 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 DPPA2P1-201ENST00000428060 556 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 MTCO2P11-201ENST00000431069 680 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 MTND3P21-201ENST00000433774 331 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC002486.1-201ENST00000435098 391 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 CYCSP43-201ENST00000438233 310 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AL133547.1-201ENST00000448546 220 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 PSPHP1-201ENST00000450062 261 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 CEACAMP4-201ENST00000457676 421 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 SNORD97-201ENST00000459187 142 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 RPL21P104-201ENST00000464143 478 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC010631.1-201ENST00000474150 156 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC092451.1-201ENST00000480211 153 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 RNU6-314P-201ENST00000516574 104 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 RNA5SP309-201ENST00000516670 106 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 RNU6-410P-201ENST00000517006 107 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 RNU6-1220P-201ENST00000517126 108 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC008011.1-201ENST00000545989 227 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC093012.1-202ENST00000549403 582 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 MIR3922-201ENST00000585192 84 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms