Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AL365496.1-201ENST00000426885 215 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 MTATP6P30-201ENST00000443540 664 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 Z99127.3-201ENST00000448158 395 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 RPS29P12-201ENST00000460178 152 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 RN7SKP18-201ENST00000516005 275 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC022616.6-201ENST00000520479 119 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC123904.2-201ENST00000548059 300 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC015917.1-201ENST00000579654 510 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 NIFKP6-201ENST00000598115 845 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC121334.2-201ENST00000605387 271 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 FTX_3.1-201ENST00000610451 147 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC122133.1-201ENST00000613964 233 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 API5P2-201ENST00000397055 1498 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 PABPC1P9-201ENST00000426076 1612 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 RNU6-533P-201ENST00000384144 107 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 SNORD17-201ENST00000390930 237 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AL645937.1-202ENST00000421799 937 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 DDX3P2-201ENST00000446138 111 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AL133217.1-201ENST00000450980 425 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 ZNF114P1-201ENST00000453500 292 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 ART2BP-201ENST00000453501 499 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AL139824.2-201ENST00000458731 1095 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC103987.1-201ENST00000473394 348 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC104619.4-201ENST00000510773 249 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 RNA5SP290-201ENST00000517133 127 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC025881.1-201ENST00000518851 512 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC103843.2-201ENST00000530523 682 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 ZNF519P3-201ENST00000557158 1032 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AL359999.1-201ENST00000604513 294 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC004832.5-201ENST00000608677 401 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC108747.1-201ENST00000609508 535 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 MIR7851-201ENST00000610611 160 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 uc_338.1-201ENST00000612113 180 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 SNORD39.4-201ENST00000620099 78 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC068831.8-201ENST00000620171 435 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC110079.1-202ENST00000635213 138 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AC010149.2-201ENST00000637608 315 ntBASIC3.16□□□□□ -1.9
VPS33AQ96AX1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS33AQ96AX1 AL359693.1-201ENST00000614959 2407 ntBASIC3.15□□□□□ -1.9
VPS33AQ96AX1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.15□□□□□ -1.9
VPS33AQ96AX1 ZNF285B-201ENST00000561698 1767 ntBASIC3.15□□□□□ -1.9
VPS33AQ96AX1 MTND5P29-201ENST00000458676 1807 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 FTLP6-201ENST00000355274 422 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 RNU1-105P-201ENST00000363470 161 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 MIR888-201ENST00000401186 77 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AL049545.1-201ENST00000401856 572 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AL031577.2-201ENST00000404133 280 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 MIR1289-1-201ENST00000408836 144 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 RN7SKP263-201ENST00000411194 309 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 HSFY4P-201ENST00000415994 1181 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 SYF2P2-201ENST00000417620 583 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AC006366.1-201ENST00000422002 759 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AC092447.3-201ENST00000426027 686 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms