Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 SNORA36C-201ENST00000384289 132 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 U3.42-201ENST00000408746 214 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 RPL35AP22-201ENST00000436855 335 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 RN7SL75P-201ENST00000461926 281 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 RN7SL542P-201ENST00000467147 294 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC007458.1-201ENST00000542812 373 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 MIR3118-1-201ENST00000581787 76 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC009977.1-201ENST00000586015 570 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 HMGN1P30-201ENST00000589286 268 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC093227.2-201ENST00000589357 285 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AL110115.1-201ENST00000614396 364 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC009090.3-201ENST00000616553 565 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC091953.2-201ENST00000623979 160 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC010149.2-201ENST00000637608 315 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 DDX10P1-201ENST00000448545 1933 ntBASIC3.59□□□□□ -1.83
SMARCE1Q969G3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.59□□□□□ -1.83
SMARCE1Q969G3 AC005832.2-201ENST00000538921 1430 ntBASIC3.59□□□□□ -1.84
SMARCE1Q969G3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.59□□□□□ -1.84
SMARCE1Q969G3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AF117829.1-206ENST00000621883 3802 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 RNA5SP50-201ENST00000363731 107 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AL109755.1-201ENST00000401791 649 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 Y_RNA.598-201ENST00000410480 95 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AC091286.1-201ENST00000431233 461 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 TIMM9P1-201ENST00000436122 256 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 RPL17P49-201ENST00000443728 411 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AL592447.1-201ENST00000447592 540 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 ST13P20-201ENST00000447996 1065 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 RNU7-59P-201ENST00000459101 61 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 HSPE1P6-201ENST00000479457 291 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AC002456.2-201ENST00000509356 380 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 RNA5SP385-201ENST00000515947 110 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 MIR3146-201ENST00000580367 79 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 RSL24D1P11-201ENST00000591045 491 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AC073657.2-201ENST00000605661 303 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 U3.45-201ENST00000607547 219 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AC245008.1-201ENST00000608123 476 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 BX664608.1-201ENST00000610519 487 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AC245517.5-201ENST00000611529 162 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AL355365.1-201ENST00000616480 294 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AL136313.1-201ENST00000624804 202 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AP003399.1-201ENST00000637534 361 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 AL390237.1-201ENST00000404226 1415 ntBASIC3.58□□□□□ -1.84
SMARCE1Q969G3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMARCE1Q969G3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 DEFB108F-201ENST00000344638 222 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 RNU5A-1-201ENST00000362698 116 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 RNY4P16-201ENST00000364768 94 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 RNU4-91P-201ENST00000364778 135 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 RNU6-297P-201ENST00000384636 107 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 FCF1P10-201ENST00000407590 479 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 HMGN1P14-201ENST00000412459 517 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 HMGN2P31-201ENST00000432430 273 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 PGBD4P3-201ENST00000440731 581 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 USP9YP29-201ENST00000445112 563 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AC012181.1-201ENST00000479895 423 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms