Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL158801.5-201ENST00000623123 465 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.35□□□□□ -2.03
TOPBP1Q92547 Y_RNA.205-201ENST00000364128 113 ntBASIC2.35□□□□□ -2.03
TOPBP1Q92547 MTATP6P31-201ENST00000406985 692 ntBASIC2.35□□□□□ -2.03
TOPBP1Q92547 CALM1P1-201ENST00000442082 433 ntBASIC2.35□□□□□ -2.03
TOPBP1Q92547 MTND3P6-201ENST00000485242 339 ntBASIC2.35□□□□□ -2.03
TOPBP1Q92547 AIG1P1-201ENST00000503376 148 ntBASIC2.35□□□□□ -2.03
TOPBP1Q92547 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.35□□□□□ -2.03
TOPBP1Q92547 MTCYBP41-201ENST00000528913 1123 ntBASIC2.35□□□□□ -2.03
TOPBP1Q92547 AC109635.4-202ENST00000531666 412 ntBASIC2.35□□□□□ -2.03
TOPBP1Q92547 AC110792.4-201ENST00000609843 298 ntBASIC2.35□□□□□ -2.03
TOPBP1Q92547 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
TOPBP1Q92547 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TOPBP1Q92547 AP001350.1-201ENST00000601906 1524 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.34□□□□□ -2.03
TOPBP1Q92547 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TOPBP1Q92547 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TOPBP1Q92547 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TOPBP1Q92547 RNU6-1080P-201ENST00000383982 107 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 RNU1-101P-201ENST00000391171 127 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 AL023807.1-201ENST00000407932 359 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 MTCO3P4-201ENST00000419236 787 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 Z85994.2-201ENST00000434327 452 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.34□□□□□ -2.03
TOPBP1Q92547 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.34□□□□□ -2.03
TOPBP1Q92547 SSXP4-201ENST00000451349 245 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 COX6CP14-201ENST00000469580 174 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 AC104689.1-201ENST00000473356 768 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 RNU6-1073P-201ENST00000517182 106 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 HSPE1P20-201ENST00000538133 289 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.34□□□□□ -2.03
TOPBP1Q92547 AC023813.2-201ENST00000564321 469 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 MIR151B-201ENST00000584249 96 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 AC008687.2-201ENST00000597865 520 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 AL009028.1-201ENST00000604895 802 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 AC107905.1-201ENST00000616204 426 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 AL391597.1-201ENST00000618707 694 ntBASIC2.34□□□□□ -2.03
TOPBP1Q92547 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
TOPBP1Q92547 RNU6-1293P-201ENST00000384077 107 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 SSXP9-201ENST00000417503 292 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 FO393419.3-201ENST00000428741 282 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TOPBP1Q92547 RPL17P49-201ENST00000443728 411 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.33□□□□□ -2.04
TOPBP1Q92547 RPL21P39-201ENST00000463605 483 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 RPS29P1-201ENST00000465274 159 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 RNU1-61P-201ENST00000516107 151 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 AC008562.1-201ENST00000521763 330 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.33□□□□□ -2.04
TOPBP1Q92547 MTATP6P3-201ENST00000581686 676 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
TOPBP1Q92547 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.33□□□□□ -2.04
TOPBP1Q92547 RNU6-156P-201ENST00000621869 107 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.33□□□□□ -2.04
TOPBP1Q92547 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TOPBP1Q92547 AP000560.1-201ENST00000624150 1937 ntBASIC2.33□□□□□ -2.04
TOPBP1Q92547 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.33□□□□□ -2.04
TOPBP1Q92547 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 RNU6-98P-201ENST00000384173 107 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 MIR1304-201ENST00000408243 91 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 Z85995.1-201ENST00000415547 335 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 COX6CP12-201ENST00000446748 202 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 OR51B8P-201ENST00000449892 769 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC011979.1-201ENST00000472300 483 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 RPL21P93-201ENST00000480465 489 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC233702.1-201ENST00000482905 502 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC093591.1-201ENST00000491435 481 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 SNORD59.2-201ENST00000516873 68 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC004923.2-201ENST00000529649 369 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC119674.1-220ENST00000641502 1048 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TOPBP1Q92547 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 RNU6-335P-201ENST00000364563 113 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 MIR598-201ENST00000384868 97 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 MIR1250-201ENST00000408098 113 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 MIR1303-201ENST00000408625 86 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 HSPE1P1-201ENST00000421494 318 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AP002345.1-201ENST00000456493 928 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AL359273.1-201ENST00000510918 627 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 RNU6-1223P-201ENST00000517124 104 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 SUMO2P14-201ENST00000604488 293 ntBASIC2.32□□□□□ -2.04
TOPBP1Q92547 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.32□□□□□ -2.04
TOPBP1Q92547 SNHG22-203ENST00000617833 660 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms