Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 MTCO1P27-201ENST00000448269 226 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC005297.2-201ENST00000450430 606 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 USP9YP10-201ENST00000454868 628 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC026410.2-201ENST00000460281 156 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 RPL30P14-201ENST00000482744 348 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC093767.1-201ENST00000504523 156 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 MTCO3P28-201ENST00000513351 515 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 RNA5SP380-201ENST00000517190 98 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 HSPA8P13-201ENST00000523715 472 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC008127.2-201ENST00000549925 1075 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 EIF4BP1-201ENST00000554881 351 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AL451007.1-201ENST00000595491 289 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 DUXAP4-201ENST00000603046 613 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC004987.4-201ENST00000603383 338 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 MTCYBP22-201ENST00000603788 447 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AL138880.2-201ENST00000616214 239 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 ELL2P3-201ENST00000457883 1602 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AC233263.6-201ENST00000631132 1963 ntBASIC2.6□□□□□ -1.99
RNF138Q8WVD3 AL022578.1-201ENST00000439330 1433 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 MTCO1P23-201ENST00000415223 1526 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 Y_RNA.18-201ENST00000362461 102 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 RNU6-462P-201ENST00000362659 105 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 RNU6-777P-201ENST00000364265 104 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 SNORA18.3-201ENST00000384122 132 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 MIR512-1-201ENST00000384913 84 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 HMGB1P17-201ENST00000403495 628 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 Z92545.1-201ENST00000411782 234 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 SSXP9-201ENST00000417503 292 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 LSM1P1-201ENST00000438629 273 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AL513043.1-201ENST00000439124 535 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AL512286.1-201ENST00000439244 400 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 KATNBL1P6-201ENST00000453433 915 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AC114981.1-201ENST00000503897 678 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 FAM60DP-201ENST00000524174 632 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AP005205.1-201ENST00000563503 508 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 RPL23AP78-201ENST00000599928 470 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AP001330.4-201ENST00000604350 154 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 RNU6-88P-201ENST00000606801 100 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AC107214.2-201ENST00000608204 634 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AC106028.5-201ENST00000610332 395 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AC090116.1-201ENST00000615679 446 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 AC025588.4-201ENST00000615802 908 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 CYP3A51P-201ENST00000633513 256 ntBASIC2.59□□□□□ -1.99
RNF138Q8WVD3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RNF138Q8WVD3 GDI2P1-201ENST00000429312 1336 ntBASIC2.59□□□□□ -2
RNF138Q8WVD3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.59□□□□□ -2
RNF138Q8WVD3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.59□□□□□ -2
RNF138Q8WVD3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RNF138Q8WVD3 MTND5P7-201ENST00000413558 1798 ntBASIC2.59□□□□□ -2
RNF138Q8WVD3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.59□□□□□ -2
RNF138Q8WVD3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RNF138Q8WVD3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
RNF138Q8WVD3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.58□□□□□ -2
RNF138Q8WVD3 MT-TH-201ENST00000387441 69 ntBASIC2.58□□□□□ -2
RNF138Q8WVD3 AL024474.1-201ENST00000404655 591 ntBASIC2.58□□□□□ -2
RNF138Q8WVD3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RNF138Q8WVD3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.58□□□□□ -2
RNF138Q8WVD3 RPS15AP38-201ENST00000413110 372 ntBASIC2.58□□□□□ -2
RNF138Q8WVD3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.58□□□□□ -2
RNF138Q8WVD3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.58□□□□□ -2
RNF138Q8WVD3 SEPT2P1-201ENST00000419651 180 ntBASIC2.58□□□□□ -2
RNF138Q8WVD3 PSMA6P3-201ENST00000428242 164 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms