Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.73□□□□□ -1.97
RNF139Q8WU17 AL158211.4-201ENST00000606988 584 ntBASIC2.73□□□□□ -1.97
RNF139Q8WU17 AC018926.1-201ENST00000616335 435 ntBASIC2.73□□□□□ -1.97
RNF139Q8WU17 MIR6733-201ENST00000635723 61 ntBASIC2.73□□□□□ -1.97
RNF139Q8WU17 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RNF139Q8WU17 AL136360.1-201ENST00000503377 1900 ntBASIC2.73□□□□□ -1.97
RNF139Q8WU17 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.73□□□□□ -1.97
RNF139Q8WU17 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RNF139Q8WU17 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF139Q8WU17 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 RNU6-217P-201ENST00000384164 104 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 AL139039.1-201ENST00000401900 692 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RNF139Q8WU17 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 AC013262.1-201ENST00000426710 252 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 GTF2IP20-201ENST00000431663 360 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 CACYBPP2-201ENST00000453625 678 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 MTND1P9-201ENST00000453775 944 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 RNA5SP471-201ENST00000516971 106 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 AC087465.1-201ENST00000560574 245 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 MIR3117-201ENST00000584034 78 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 AC004987.4-201ENST00000603383 338 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 AC069304.2-201ENST00000605154 435 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 AL390208.1-201ENST00000605885 644 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 AL357080.1-201ENST00000617394 239 ntBASIC2.72□□□□□ -1.97
RNF139Q8WU17 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
RNF139Q8WU17 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RNF139Q8WU17 RNU6-1122P-201ENST00000384449 107 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RNF139Q8WU17 UBE2V1P2-201ENST00000397758 440 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 AL096701.2-201ENST00000416920 238 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 USP9YP20-201ENST00000419224 558 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 AL513175.2-201ENST00000422071 443 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 Z80107.1-201ENST00000436830 412 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 PTGES3P1-201ENST00000439531 483 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 AC011816.1-201ENST00000441346 546 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 OR10R1P-201ENST00000441524 1141 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 GSTA11P-201ENST00000452866 669 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 SNORA59A-201ENST00000459326 152 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 RPS20P20-201ENST00000460498 340 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 DEFB130C-202ENST00000530001 230 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 SLC2A13P1-201ENST00000531560 322 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 ELOCP31-201ENST00000540463 467 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 MIR4446-201ENST00000578505 67 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.71□□□□□ -1.98
RNF139Q8WU17 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
RNF139Q8WU17 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF139Q8WU17 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RNF139Q8WU17 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF139Q8WU17 RNU6-359P-201ENST00000365466 108 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 MIR592-201ENST00000384959 97 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 U3.20-201ENST00000390909 217 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 RNA5SP210-201ENST00000391034 120 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 SEPT2P1-201ENST00000419651 180 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 ZNF863P-201ENST00000426746 417 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 RPL39P40-201ENST00000445481 146 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 DDX3P2-201ENST00000446138 111 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 AC233279.1-201ENST00000455300 423 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 SNORD121B-201ENST00000458838 81 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 RPL31P50-201ENST00000471002 296 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 RPS20P22-201ENST00000473700 357 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RNF139Q8WU17 SCARNA11.3-201ENST00000517276 130 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 AC087276.1-201ENST00000529659 480 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms