Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC009318.2-201ENST00000610917 651 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AL137847.3-201ENST00000611521 109 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AL356266.1-201ENST00000623311 483 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC068880.5-201ENST00000624331 290 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC080188.3-201ENST00000624842 748 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC093591.3-201ENST00000634516 308 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC110079.1-202ENST00000635213 138 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 CU459211.1-201ENST00000635667 749 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 FO624990.1-201ENST00000636373 85 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC135776.4-201ENST00000624300 1904 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 RNA5SP393-201ENST00000363423 117 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 SUGT1P1-201ENST00000379514 476 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 SNORD51-201ENST00000384320 80 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 LUZP4P1-201ENST00000415420 344 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC092634.6-201ENST00000418558 192 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC005005.2-201ENST00000420779 380 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC092634.2-201ENST00000428146 1010 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 GDI2P1-201ENST00000429312 1336 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC104058.1-201ENST00000448028 297 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AL118520.1-201ENST00000450770 291 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC008628.1-201ENST00000508663 265 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 SNORA31.11-201ENST00000516528 139 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 RNU6-334P-201ENST00000517072 102 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 RNA5SP402-201ENST00000517148 110 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC087272.1-201ENST00000523624 533 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC103710.1-201ENST00000610003 901 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 VN1R74P-201ENST00000613259 503 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 Y_RNA.783-201ENST00000613546 102 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 AC078880.5-201ENST00000617845 421 ntBASIC2.04□□□□□ -2.08
LMX1AQ8TE12 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 MTCO1P23-201ENST00000415223 1526 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 RNU5B-1-201ENST00000363286 116 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 RNU6-1155P-201ENST00000363554 107 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 RNA5SP99-201ENST00000364020 114 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 RN7SKP226-201ENST00000364912 300 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 ANAPC10P1-201ENST00000395991 556 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AL136133.1-201ENST00000413694 376 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 MTCYBP32-201ENST00000427945 1084 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AC012497.1-201ENST00000429392 575 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 MTCYBP15-201ENST00000433123 1127 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 CR769767.1-201ENST00000436337 346 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 MTCO1P48-201ENST00000448024 1096 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 COX6CP18-201ENST00000448769 222 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 SNRPGP6-201ENST00000451124 220 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 MRPL42P4-201ENST00000453267 443 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AC026414.1-201ENST00000504046 698 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 BOLA3P3-201ENST00000505182 232 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 RNU6-548P-201ENST00000517083 115 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AC011260.1-201ENST00000578420 472 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AP003973.1-201ENST00000604639 691 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AC091946.2-201ENST00000606105 291 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AC027309.3-201ENST00000623419 351 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 AC099063.3-201ENST00000642066 185 ntBASIC2.03□□□□□ -2.08
LMX1AQ8TE12 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LMX1AQ8TE12 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 MIRLET7G-201ENST00000362280 84 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 RNU1-138P-201ENST00000384093 164 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 MIR144-201ENST00000384886 86 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AC016769.3-201ENST00000396562 315 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AL133264.1-201ENST00000407157 562 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AL589880.1-201ENST00000448271 287 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AC073901.1-201ENST00000462471 408 ntBASIC2.02□□□□□ -2.09
LMX1AQ8TE12 AP000852.1-201ENST00000472460 573 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms