Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 Y_RNA.215-201ENST00000364204 112 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 RNA5SP90-201ENST00000364801 99 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 SNORD73A-201ENST00000386062 65 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 AL079342.1-201ENST00000401460 267 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 COX6B1P1-201ENST00000415962 213 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 MRPS21P2-201ENST00000424704 264 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 AC006946.1-201ENST00000429106 328 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 BX323845.1-201ENST00000432417 179 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 FHP1-201ENST00000442741 703 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 RPL7AP61-201ENST00000443410 636 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 RPL37P6-201ENST00000460682 294 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 RPL37P6-202ENST00000464216 403 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 AC006511.1-201ENST00000470614 315 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 HMGN2P13-201ENST00000476476 274 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 AC010409.1-201ENST00000487382 476 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 RPL30P1-201ENST00000488676 339 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 PDCD5P2-201ENST00000507570 312 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 MIR2355-201ENST00000517199 87 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 OR1M4P-201ENST00000589199 287 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 AC008745.1-201ENST00000604064 271 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 MIR6839-201ENST00000620425 113 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 PRO1804-201ENST00000623780 2050 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-834P-201ENST00000362367 110 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RPL21P75-201ENST00000396599 483 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RPL21P28-201ENST00000401418 483 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AL078599.1-201ENST00000402075 293 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 GPS2P1-201ENST00000411761 986 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AL590556.1-201ENST00000423231 483 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RPL34P20-201ENST00000442771 351 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 SSXP4-201ENST00000451349 245 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC016925.1-201ENST00000458303 298 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RPL21P11-201ENST00000461458 483 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RPL21P39-201ENST00000463605 483 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RN7SL459P-201ENST00000481078 302 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC132942.1-201ENST00000486753 483 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC093591.1-201ENST00000491435 481 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC008897.1-201ENST00000494006 347 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RPL21P16-201ENST00000495531 483 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RN7SL591P-201ENST00000496150 292 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 HMGB1P21-201ENST00000502313 581 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 OR7H2P-201ENST00000513483 306 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.679-201ENST00000516416 91 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.689-201ENST00000516589 107 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-347P-201ENST00000516658 105 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RNU2-31P-201ENST00000516954 155 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC025755.1-201ENST00000521306 278 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 DEFB108D-201ENST00000527787 222 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC233702.2-202ENST00000562547 291 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 MIR3976-201ENST00000606807 139 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AL591926.8-201ENST00000616876 211 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC004817.4-201ENST00000602396 3625 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 AC100821.1-201ENST00000523153 2479 ntBASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NKX2-3Q8TAU0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 RN7SKP186-201ENST00000365371 303 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 SNORD63-201ENST00000384262 68 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 MIR1182-201ENST00000408363 97 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 RN7SKP16-201ENST00000410180 299 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-257P-201ENST00000410238 98 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 RNU2-52P-201ENST00000410680 190 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 RNU5E-9P-201ENST00000411164 104 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 RPS15AP6-201ENST00000420703 385 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 MTCO1P39-201ENST00000426148 480 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms