Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNU6-842P-201ENST00000384269 107 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 Y_RNA.485-201ENST00000384395 102 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 Y_RNA.512-201ENST00000384518 102 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNU1-82P-201ENST00000390851 165 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNU6-823P-201ENST00000391042 103 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 MIR1271-201ENST00000408537 86 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNU6-55P-201ENST00000411092 107 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 MRPS18CP6-201ENST00000423587 223 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RPS26P2-201ENST00000440331 348 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RPS5P7-201ENST00000456664 608 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RPS29P22-201ENST00000472363 168 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RPL21P103-201ENST00000479921 488 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC026979.1-201ENST00000492525 396 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC091868.1-201ENST00000508746 304 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC104136.1-201ENST00000512969 394 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNU6-352P-201ENST00000516908 107 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RN7SKP60-201ENST00000516985 239 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 MIR4512-201ENST00000583257 77 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC012669.1-201ENST00000603209 283 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNF138P2-201ENST00000603490 592 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 SNORD58B-201ENST00000607313 66 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC067931.1-201ENST00000624190 671 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 MIR4496-201ENST00000635896 61 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 AC005332.5-201ENST00000591222 2919 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 MAPK10-263ENST00000641052 4307 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 Y_RNA.2-201ENST00000362330 96 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 RNU6-214P-201ENST00000384130 107 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 SNORA51.8-201ENST00000384234 132 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 SNORA41-201ENST00000384675 132 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AL590762.2-201ENST00000395798 571 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 EIF4EP1-201ENST00000422311 642 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AL160275.3-201ENST00000423876 471 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 TDGF1P1-201ENST00000445734 527 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AL583843.1-201ENST00000456070 346 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC112492.4-201ENST00000456549 352 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC108751.2-201ENST00000469993 231 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC084198.1-201ENST00000477747 402 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC104564.1-201ENST00000493028 407 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC009901.1-201ENST00000506703 541 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC092436.3-201ENST00000511788 257 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 RNU6-390P-201ENST00000516259 103 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 RNU6-677P-201ENST00000516914 101 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AP005902.1-201ENST00000521358 186 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 EDDM3DP-201ENST00000554692 434 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC012119.1-201ENST00000603184 222 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AL450472.3-201ENST00000615578 367 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AL731566.2-201ENST00000618971 317 ntBASIC4.43□□□□□ -1.7
NUP43Q8NFH3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP43Q8NFH3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms