Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
USP38Q8NB14 Y_RNA.436-201ENST00000384097 102 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 AL136116.1-201ENST00000403591 381 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 AP000567.1-201ENST00000406413 156 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 MIR1261-201ENST00000408659 82 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.87□□□□□ -1.79
USP38Q8NB14 UBE2FP1-201ENST00000416536 447 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.87□□□□□ -1.79
USP38Q8NB14 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.87□□□□□ -1.79
USP38Q8NB14 MTND1P27-201ENST00000451117 902 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.87□□□□□ -1.79
USP38Q8NB14 FCF1P3-201ENST00000496394 590 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 NDUFB4P2-201ENST00000509515 391 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 AC022483.1-201ENST00000514020 567 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.87□□□□□ -1.79
USP38Q8NB14 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.87□□□□□ -1.79
USP38Q8NB14 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.87□□□□□ -1.79
USP38Q8NB14 DEFB108D-201ENST00000527787 222 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.87□□□□□ -1.79
USP38Q8NB14 MTCYBP33-201ENST00000575007 1130 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 MIR3690-201ENST00000580266 75 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 AC040904.1-201ENST00000590850 223 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.87□□□□□ -1.79
USP38Q8NB14 AC012443.1-201ENST00000605605 231 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 AC004908.2-201ENST00000609090 574 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.87□□□□□ -1.79
USP38Q8NB14 AC005832.2-201ENST00000538921 1430 ntBASIC3.87□□□□□ -1.79
USP38Q8NB14 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.86□□□□□ -1.79
USP38Q8NB14 AL356274.2-201ENST00000624379 3752 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 DDX10P1-201ENST00000448545 1933 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AC005183.1-201ENST00000603687 1979 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
USP38Q8NB14 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP38Q8NB14 Y_RNA.201-201ENST00000364052 96 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 Y_RNA.318-201ENST00000365131 97 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP38Q8NB14 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.86□□□□□ -1.79
USP38Q8NB14 MIR19A-201ENST00000384878 82 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 MIR591-201ENST00000385290 95 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 SNORD17-201ENST00000390930 237 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 RNU6-278P-201ENST00000390945 109 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP38Q8NB14 MRPL42P2-201ENST00000403169 426 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 RN7SKP285-201ENST00000410137 318 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 RNU4-65P-201ENST00000410473 140 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 MTND1P21-201ENST00000412991 285 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.86□□□□□ -1.79
USP38Q8NB14 RPL35AP22-201ENST00000436855 335 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AL049734.2-201ENST00000441066 616 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.86□□□□□ -1.79
USP38Q8NB14 RPL17P49-201ENST00000443728 411 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.86□□□□□ -1.79
USP38Q8NB14 snoU109.1-201ENST00000459339 135 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 RPL27AP5-201ENST00000469428 449 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 VN1R17P-201ENST00000472048 1090 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AC108860.1-201ENST00000484521 383 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.86□□□□□ -1.79
USP38Q8NB14 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.86□□□□□ -1.79
USP38Q8NB14 CBX3P3-201ENST00000508108 532 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.86□□□□□ -1.79
USP38Q8NB14 MTCO2P32-201ENST00000514865 403 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 RN7SKP60-201ENST00000516985 239 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 RNU6-201P-201ENST00000517100 61 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AP003181.2-201ENST00000528941 181 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.86□□□□□ -1.79
USP38Q8NB14 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.86□□□□□ -1.79
USP38Q8NB14 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.86□□□□□ -1.79
USP38Q8NB14 MIR3611-201ENST00000584484 83 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AC009977.1-201ENST00000586015 570 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.86□□□□□ -1.79
USP38Q8NB14 AC011468.4-201ENST00000603942 409 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AC087752.4-201ENST00000605911 462 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AL391813.2-201ENST00000609113 322 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 AC006023.2-201ENST00000609916 167 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 MIR6130-201ENST00000619419 109 ntBASIC3.86□□□□□ -1.79
USP38Q8NB14 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.86□□□□□ -1.79
USP38Q8NB14 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP38Q8NB14 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.86□□□□□ -1.79
USP38Q8NB14 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP38Q8NB14 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.85□□□□□ -1.79
USP38Q8NB14 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP38Q8NB14 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.85□□□□□ -1.79
USP38Q8NB14 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.85□□□□□ -1.79
USP38Q8NB14 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP38Q8NB14 RNU5E-8P-201ENST00000363502 116 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 RNY4P34-201ENST00000364779 95 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 U3.39-201ENST00000408569 239 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.85□□□□□ -1.79
USP38Q8NB14 RPL21P32-201ENST00000419877 477 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.85□□□□□ -1.79
USP38Q8NB14 AC090774.1-201ENST00000435925 246 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 HMGB1P12-201ENST00000438594 598 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.85□□□□□ -1.79
USP38Q8NB14 AL592447.1-201ENST00000447592 540 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 MTND1P29-201ENST00000448112 647 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 NANOGNBP1-201ENST00000448444 480 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.85□□□□□ -1.79
USP38Q8NB14 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.85□□□□□ -1.79
USP38Q8NB14 AL033528.1-201ENST00000453780 140 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms