Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 OR5H15-201ENST00000383696 930 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 MIR325-201ENST00000385260 98 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 MCTS2P-201ENST00000394552 546 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 ANAPC10P1-201ENST00000395991 556 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AL358075.3-201ENST00000426289 226 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 MTCO1P3-201ENST00000429327 192 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC093155.1-201ENST00000440164 826 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 CR848007.1-201ENST00000442354 1699 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 RPS15AP27-201ENST00000449183 343 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 MTND2P24-201ENST00000453434 806 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC244505.3-201ENST00000454598 187 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AL049874.1-201ENST00000489560 388 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 MTCO1P9-201ENST00000505577 1534 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 SCARNA15.2-201ENST00000516409 127 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 RNA5SP281-201ENST00000516504 135 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC022861.1-201ENST00000522981 663 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AP003066.2-201ENST00000529375 555 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AP003049.1-201ENST00000529418 457 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC124947.2-202ENST00000552735 133 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC068135.2-201ENST00000569293 1028 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 MIR5194-201ENST00000582634 120 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC007938.3-201ENST00000604965 623 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC005332.6-201ENST00000613178 446 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC010975.3-201ENST00000618727 978 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AC084824.4-201ENST00000620106 731 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AP003399.1-201ENST00000637534 361 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 MIR1322-201ENST00000638013 71 ntBASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC005539.1-201ENST00000443768 1479 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AL356473.1-201ENST00000406203 1408 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AL022578.1-201ENST00000439330 1433 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 SNRPEP3-201ENST00000338402 276 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 RNU6-216P-201ENST00000363282 104 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 MIR514A1-201ENST00000385133 98 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 U3.37-201ENST00000408528 213 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AL592310.1-201ENST00000414330 671 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC107081.1-201ENST00000414975 361 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC092634.2-201ENST00000428146 1010 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 MYL8P-204ENST00000431574 518 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC092155.2-201ENST00000454675 477 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AL135752.1-201ENST00000479477 471 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC008628.1-201ENST00000508663 265 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 XKRY-201ENST00000510392 1100 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 TTC39CP1-201ENST00000512513 755 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC104417.1-201ENST00000523974 751 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC105137.2-201ENST00000569073 466 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC090615.1-201ENST00000577519 154 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC005776.1-201ENST00000603164 290 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC024560.3-201ENST00000608482 349 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC004067.1-201ENST00000608733 700 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC245517.5-201ENST00000611529 162 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AL512506.1-201ENST00000613918 449 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC034102.8-201ENST00000615146 484 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AL596245.1-201ENST00000618994 362 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 MIR6766-201ENST00000622641 72 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AL160394.1-201ENST00000624765 724 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 MIR4275-201ENST00000636486 87 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC007785.2-201ENST00000598627 1916 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 AC135776.4-201ENST00000624300 1904 ntBASIC2.03□□□□□ -2.08
ZIC4Q8N9L1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.02□□□□□ -2.09
ZIC4Q8N9L1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ZIC4Q8N9L1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
ZIC4Q8N9L1 AC107982.1-201ENST00000507171 1300 ntBASIC2.02□□□□□ -2.09
ZIC4Q8N9L1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms