Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 EXOC5P1-201ENST00000510543 1969 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 U3.11-201ENST00000364476 212 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 Y_RNA.296-201ENST00000364930 108 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 RNU6-1215P-201ENST00000384441 102 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 SNORA11.1-201ENST00000408133 129 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 RNU2-71P-201ENST00000411395 189 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AF274854.1-201ENST00000413236 615 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC133104.1-201ENST00000429100 218 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 CYCSP4-201ENST00000429682 331 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 DNAJC19P4-201ENST00000440115 345 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 RPL26P6-201ENST00000440913 438 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 MTND1P1-201ENST00000445453 368 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 NANOGNBP1-201ENST00000448444 480 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC079448.1-201ENST00000449377 373 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC010493.1-201ENST00000513479 292 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 SNORA70.14-201ENST00000516205 110 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 SNORA31.8-201ENST00000516327 108 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 RN7SKP83-201ENST00000516512 178 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 SNORA70.18-201ENST00000516696 98 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 RN7SKP209-201ENST00000516888 304 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 SNORA31.22-201ENST00000517204 135 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 ERHP1-201ENST00000523006 310 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC123904.3-201ENST00000547218 814 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC005951.1-201ENST00000576706 485 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 MIR3167-201ENST00000579623 85 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AF038458.1-201ENST00000588406 262 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AP001330.4-201ENST00000604350 154 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC006023.2-201ENST00000609916 167 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AL592295.2-201ENST00000612578 206 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC013476.2-201ENST00000614456 459 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AL713922.2-201ENST00000619384 716 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AC073534.2-201ENST00000620377 381 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 AL136313.1-201ENST00000624804 202 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 OR5AK4P-201ENST00000635912 903 ntBASIC3.34□□□□□ -1.87
BEST3Q8N1M1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.34□□□□□ -1.87
BEST3Q8N1M1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
BEST3Q8N1M1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
BEST3Q8N1M1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
BEST3Q8N1M1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 DEFB108F-201ENST00000344638 222 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 RNU6-1284P-201ENST00000363701 100 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 RN7SKP226-201ENST00000364912 300 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 MIR34B-201ENST00000385076 84 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 GSTA9P-201ENST00000406231 611 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 TXNP7-201ENST00000406296 293 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 Y_RNA.599-201ENST00000410489 109 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC007283.2-201ENST00000424739 197 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AL358934.1-201ENST00000432346 324 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AL159987.2-201ENST00000432754 307 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC008481.1-201ENST00000463278 396 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC004801.2-202ENST00000463559 283 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC108860.1-201ENST00000484521 383 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC108078.1-201ENST00000508073 725 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 RNU2-10P-201ENST00000516375 211 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 RN7SKP244-201ENST00000516513 307 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC022616.3-201ENST00000523940 148 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC128657.1-201ENST00000549459 145 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AL121576.1-201ENST00000556055 276 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 MED28P6-201ENST00000558776 231 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AL845331.3-202ENST00000562856 261 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 MIR4293-201ENST00000584305 78 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms