Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC107934.1-201ENST00000522215 217 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AP000889.1-201ENST00000530968 660 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC011471.1-201ENST00000585766 187 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AP001429.1-201ENST00000602568 530 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC121334.2-201ENST00000605387 271 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC072046.2-201ENST00000618366 268 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC136475.10-201ENST00000620253 385 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC091953.2-201ENST00000623979 160 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS52Q8N1B4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS52Q8N1B4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.84□□□□□ -1.8
VPS52Q8N1B4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 RNU4-35P-201ENST00000362588 141 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 RNU6-1078P-201ENST00000364522 103 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 RNY4P34-201ENST00000364779 95 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 OR1AA1P-201ENST00000419597 916 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL137014.1-201ENST00000420490 1226 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC104651.1-201ENST00000427559 735 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 RAC1P7-201ENST00000445367 377 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 TPT1P14-201ENST00000448018 505 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 NANOGNBP1-201ENST00000448444 480 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 RN7SL807P-201ENST00000470923 297 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 IGHV3-76-201ENST00000522465 295 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC126177.3-201ENST00000551839 688 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL121603.1-201ENST00000553815 142 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 OR4T1P-201ENST00000554933 911 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 MIR3146-201ENST00000580367 79 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AP003465.2-201ENST00000602571 373 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 XIAPP1-201ENST00000603162 600 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 TUG1_1.1-201ENST00000610654 145 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL592295.2-201ENST00000612578 206 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC026585.1-201ENST00000619582 524 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC009268.2-201ENST00000621925 457 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AL353748.2-201ENST00000622148 471 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC099654.12-201ENST00000639868 649 ntBASIC3.83□□□□□ -1.8
VPS52Q8N1B4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VPS52Q8N1B4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 RNU6-335P-201ENST00000364563 113 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 RNU6-629P-201ENST00000384061 103 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 MIR135A2-201ENST00000384854 100 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 RPL23AP32-201ENST00000395315 459 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AL391417.1-201ENST00000404100 426 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 RNU6-648P-201ENST00000410190 107 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 RNU2-71P-201ENST00000411395 189 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 ELOCP17-201ENST00000414751 326 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 MTND3P17-201ENST00000416968 344 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 HMGB3P20-201ENST00000417997 600 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC002075.2-201ENST00000425207 252 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC005326.1-201ENST00000429197 123 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC005019.1-201ENST00000436455 431 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 HMGN2P20-201ENST00000437531 273 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 MTND1P12-201ENST00000455231 147 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 VN1R17P-201ENST00000472048 1090 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.82□□□□□ -1.8
VPS52Q8N1B4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS52Q8N1B4 RNU2-27P-201ENST00000516185 142 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms