Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 MTCYBP17-201ENST00000503579 789 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC116353.3-201ENST00000511215 249 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 SNORA3.4-201ENST00000515969 96 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC239860.2-201ENST00000525886 270 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC023050.2-201ENST00000544968 387 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 HSPE1P3-201ENST00000559254 309 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC087465.1-201ENST00000560574 245 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC103710.2-201ENST00000609912 942 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 MIR6845-201ENST00000613182 61 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC006963.1-201ENST00000624003 1052 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 MTCO1P23-201ENST00000415223 1526 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 RNU6-657P-201ENST00000383904 107 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 RNU6-253P-201ENST00000384730 105 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 RNU6-1242P-201ENST00000391052 103 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AL139156.1-201ENST00000412785 841 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 HMGB1P11-201ENST00000413899 637 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC092634.6-201ENST00000418558 192 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC009237.2-201ENST00000421358 284 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 ZNF355P-201ENST00000427301 3216 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 RPL7P52-201ENST00000449200 742 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC005410.1-202ENST00000460347 485 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 RPL23AP11-201ENST00000475260 469 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 RNU6-202P-201ENST00000515998 96 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 MTND3P19-201ENST00000603825 345 ntBASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL27A1Q8IZC6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 CUL1P1-201ENST00000509510 2425 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 SNORD51-201ENST00000384320 80 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 RN7SKP123-201ENST00000410732 291 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 XKRYP1-201ENST00000423438 492 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 USP9YP11-201ENST00000427537 717 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 XKRYP2-201ENST00000432915 492 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 ATP5F1P1-201ENST00000433775 569 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 RPL35AP22-201ENST00000436855 335 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 BX322784.1-201ENST00000455793 1077 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AC092754.2-201ENST00000463506 460 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 RPL9P32-201ENST00000464118 620 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AC092185.1-201ENST00000491371 97 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AC091951.3-201ENST00000504093 246 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AC104090.1-201ENST00000506341 1171 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AC021146.8-201ENST00000507455 733 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AC107222.1-201ENST00000510899 637 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 NDUFB4P9-201ENST00000511646 388 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AC006499.2-201ENST00000513470 337 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 AP004371.1-201ENST00000525240 214 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 MIR5007-201ENST00000583098 95 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 DDX43P2-201ENST00000604753 1354 ntBASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL27A1Q8IZC6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 RNU6-600P-201ENST00000362524 99 ntBASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 RNA5SP295-201ENST00000362655 121 ntBASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 TAS2R15P-201ENST00000390674 928 ntBASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 RNU6-278P-201ENST00000390945 109 ntBASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 RABEPKP1-201ENST00000440529 1026 ntBASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.18□□□□□ -2.06
COL27A1Q8IZC6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms