Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC091178.1-203ENST00000584586 279 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC006116.10-201ENST00000591836 581 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC007619.2-201ENST00000605743 379 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AL355365.1-201ENST00000616480 294 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC008013.2-202ENST00000637965 364 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM48Q8IWZ4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM48Q8IWZ4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.4□□□□□ -1.7
TRIM48Q8IWZ4 AC103710.2-202ENST00000641454 2853 ntBASIC4.4□□□□□ -1.7
TRIM48Q8IWZ4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.4□□□□□ -1.7
TRIM48Q8IWZ4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.395-201ENST00000383945 109 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 MIR659-201ENST00000384963 97 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 U3.22-201ENST00000391120 215 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AC110754.1-201ENST00000399740 601 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 RNA5SP146-201ENST00000410743 123 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 ELOCP19-201ENST00000411919 318 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AL356387.2-201ENST00000422272 243 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 PMCHL1-202ENST00000423102 261 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 NEFMP1-201ENST00000443423 1006 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AL162388.1-201ENST00000450912 352 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 RPL23AP24-201ENST00000458203 385 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.653-201ENST00000459091 95 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AC104472.2-201ENST00000469035 601 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-1046P-201ENST00000516538 107 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AC018630.1-201ENST00000541376 925 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 IMMP1LP2-201ENST00000552954 492 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AC023043.2-201ENST00000589678 1026 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AC020634.1-201ENST00000608701 549 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AC009570.1-201ENST00000609599 745 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 U73479.1-201ENST00000618062 168 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 MIR6130-201ENST00000619419 109 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 MIR6758-201ENST00000620653 63 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 uc_338.22-201ENST00000622722 187 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 AC007998.5-201ENST00000622938 237 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 DHX9P1-201ENST00000436565 3076 ntBASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM48Q8IWZ4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AL121834.1-202ENST00000404494 277 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 VDAC1P9-201ENST00000412766 841 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AC113618.1-201ENST00000416747 285 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 RPL23AP25-201ENST00000430973 463 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AC090774.1-201ENST00000435925 246 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 MTND3P2-201ENST00000438452 342 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AC104058.1-201ENST00000448028 297 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 MTND1P17-201ENST00000448961 204 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AC012671.1-201ENST00000451912 203 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 snoU13.3-201ENST00000459441 104 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 RN7SL860P-201ENST00000473738 223 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AP002812.1-201ENST00000495378 474 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 MIR5690-201ENST00000583739 73 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AC136443.5-201ENST00000603741 370 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AL121655.1-201ENST00000605811 308 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 AL138726.1-201ENST00000614873 333 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 FAM157A-202ENST00000615155 405 ntBASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRIM48Q8IWZ4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms