Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 RNU1-101P-201ENST00000391171 127 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 RNU6-920P-201ENST00000410926 92 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AL592148.1-201ENST00000413568 445 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AL645937.1-202ENST00000421799 937 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC012498.1-201ENST00000424037 437 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 RPL21P40-201ENST00000428586 483 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC009969.1-201ENST00000438726 172 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 THAP5P1-201ENST00000439089 262 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC112653.1-201ENST00000443851 386 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 NIPA2P5-201ENST00000452282 464 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC104308.1-201ENST00000454621 333 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 RPL23AP31-201ENST00000456160 467 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 HMGN2P13-201ENST00000476476 274 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 MTND4LP22-201ENST00000508209 276 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 MTND1P22-201ENST00000510572 951 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 RNA5SP367-201ENST00000516557 118 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC090136.1-201ENST00000520009 240 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC107016.2-201ENST00000547968 190 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 GTF3AP2-201ENST00000557014 266 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC011260.1-201ENST00000578420 472 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC106028.5-201ENST00000610332 395 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AL110115.1-201ENST00000614396 364 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC068831.7-201ENST00000616954 363 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 Z99129.2-201ENST00000619967 314 ntBASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC60Q8IWA6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC002546.1-201ENST00000588041 2504 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 SNORA5B-201ENST00000363786 132 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 RNU6-114P-201ENST00000384704 105 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 U8.14-201ENST00000390843 143 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 RNU6-882P-201ENST00000391025 103 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AL354719.1-201ENST00000406535 843 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 MIR1305-201ENST00000408300 86 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 RNU2-43P-201ENST00000410306 190 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 CCDC58P2-201ENST00000417131 366 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC105272.1-201ENST00000438604 198 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AL445567.1-201ENST00000439121 144 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AL121871.1-201ENST00000443413 436 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 UQCRHP3-201ENST00000451503 251 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 RN7SL283P-201ENST00000489055 303 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC103783.1-201ENST00000520506 373 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AP003497.1-201ENST00000528472 562 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC079600.2-201ENST00000550076 130 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC135628.1-201ENST00000568867 534 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AL158211.4-201ENST00000606988 584 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 MIR6852-201ENST00000621699 66 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC008443.7-201ENST00000622195 246 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 AC091931.1-201ENST00000623488 728 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 SNORA50A-202ENST00000629536 136 ntBASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.21□□□□□ -1.9
CCDC60Q8IWA6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 RNU5F-7P-201ENST00000363696 115 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 RNU6-173P-201ENST00000364215 104 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 RNU6-359P-201ENST00000365466 108 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 RNU6-769P-201ENST00000384407 104 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 SNORA48.8-201ENST00000391324 134 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 MIR1289-1-201ENST00000408836 144 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 TPMTP3-201ENST00000411928 735 ntBASIC3.2□□□□□ -1.9
CCDC60Q8IWA6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms