Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 U4.6-201ENST00000621618 127 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC244205.2-202ENST00000635781 342 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HERC6Q8IVU3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
HERC6Q8IVU3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HERC6Q8IVU3 FARSBP1-201ENST00000435808 1778 ntBASIC3.84□□□□□ -1.8
HERC6Q8IVU3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HERC6Q8IVU3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
HERC6Q8IVU3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AC006504.1-201ENST00000562493 3666 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 RNY1P12-201ENST00000364251 105 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 RNY3P13-201ENST00000365542 102 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 RNU6-1042P-201ENST00000384204 107 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 RNA5SP107-201ENST00000411358 122 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AC018630.2-202ENST00000422992 927 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 PGBD4P3-201ENST00000440731 581 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AL662791.1-201ENST00000441992 928 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 MTND6P13-201ENST00000443510 523 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 MTND1P12-201ENST00000455231 147 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AC008481.1-201ENST00000463278 396 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 MTCO2P29-201ENST00000465212 189 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 RAP1BP2-201ENST00000478270 544 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 MTND1P3-201ENST00000484956 952 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 MTCO3P7-201ENST00000510008 774 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AC100870.1-201ENST00000522035 505 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AC093012.1-202ENST00000549403 582 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 MIR3118-1-201ENST00000581787 76 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AC106900.2-201ENST00000604994 317 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AC012531.5-201ENST00000611375 151 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 AC138932.5-201ENST00000617759 563 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 SNHG22-203ENST00000617833 660 ntBASIC3.83□□□□□ -1.8
HERC6Q8IVU3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
HERC6Q8IVU3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC058791.1-201ENST00000608412 3198 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC008568.2-201ENST00000623862 2313 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AF127577.6-201ENST00000623352 2191 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 RNY4P34-201ENST00000364779 95 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 SNORD6-201ENST00000365444 73 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 Y_RNA.436-201ENST00000384097 102 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC110754.1-201ENST00000399740 601 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC007899.1-201ENST00000412776 775 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 RPS15AP12-201ENST00000419498 388 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC019097.1-201ENST00000424783 735 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 MTCO2P7-201ENST00000446518 666 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AL049714.1-201ENST00000466686 347 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 RPS3AP14-201ENST00000483907 780 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC109464.2-201ENST00000510242 943 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 MTND3P5-201ENST00000512798 333 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 RN7SKP209-201ENST00000516888 304 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC123904.3-201ENST00000547218 814 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AL355836.1-201ENST00000555951 870 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 LARP7P3-201ENST00000579888 337 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 MIR3611-201ENST00000584484 83 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 HMGN1P30-201ENST00000589286 268 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AL732618.1-201ENST00000623251 301 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AP003355.3-201ENST00000623465 114 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC091953.2-201ENST00000623979 160 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 AC091905.1-201ENST00000624400 311 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 PISRT1-201ENST00000626175 531 ntBASIC3.82□□□□□ -1.8
HERC6Q8IVU3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms