Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC093767.1-201ENST00000504523 156 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC116562.3-201ENST00000506136 177 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 SMURF2P1-201ENST00000514992 481 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 Y_RNA.682-201ENST00000516457 100 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 RNU6-988P-201ENST00000519081 107 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC068587.5-201ENST00000528506 175 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC128657.1-201ENST00000549459 145 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AL592436.1-201ENST00000605135 558 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC087588.2-201ENST00000617667 426 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 RMST_9.1-201ENST00000619945 193 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC244100.1-202ENST00000621554 382 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 SAGE4P-201ENST00000442271 3381 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VRK3Q8IV63 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VRK3Q8IV63 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VRK3Q8IV63 MARK2P15-201ENST00000432204 2186 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VRK3Q8IV63 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VRK3Q8IV63 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VRK3Q8IV63 RNU6-1293P-201ENST00000384077 107 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 MIR513A2-201ENST00000385249 127 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 OR2AS1P-201ENST00000427827 319 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 FABP5P14-201ENST00000437273 393 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VRK3Q8IV63 RPL7P52-201ENST00000449200 742 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 AC107399.1-201ENST00000451226 265 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 AC108059.3-201ENST00000456388 214 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 PLGLA-201ENST00000465668 449 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 RN7SL604P-201ENST00000492589 296 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VRK3Q8IV63 AC098591.2-201ENST00000510152 315 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 PTP4A1P4-201ENST00000512479 322 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 RNU7-143P-201ENST00000516781 65 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 AP000889.2-201ENST00000532684 490 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 MIR4703-201ENST00000577728 79 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 AC092807.2-201ENST00000609367 243 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 uc_338.11-201ENST00000619132 160 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 RNU6-156P-201ENST00000621869 107 ntBASIC4.02□□□□□ -1.77
VRK3Q8IV63 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.02□□□□□ -1.77
VRK3Q8IV63 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC011978.2-201ENST00000569835 2054 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC011266.1-201ENST00000624119 3569 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 ZNF962P-201ENST00000443465 3140 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 SNORA62.1-201ENST00000364287 154 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 RNA5SP130-201ENST00000364431 114 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC117470.1-201ENST00000381974 330 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC019155.1-201ENST00000382242 574 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 RNU6-308P-201ENST00000390957 107 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 RNU6-370P-201ENST00000411008 104 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 BX323014.1-201ENST00000412876 237 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AL590609.2-201ENST00000421430 368 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 RSL24D1P6-201ENST00000426934 401 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 MTCYBP9-201ENST00000431021 303 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 HMGB3P11-201ENST00000440127 604 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 RPL36AP13-201ENST00000457490 317 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 SNORD121B-201ENST00000458838 81 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 RPL23AP2-201ENST00000471227 466 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC083904.1-201ENST00000487828 231 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 MTCO2P24-201ENST00000515611 426 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 RNU6-566P-201ENST00000516790 107 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms