Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SNORD116-23-201ENST00000384645 92 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 SNORA46.1-201ENST00000391069 153 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 AL139098.1-201ENST00000407291 389 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 SDCBPP1-201ENST00000440192 890 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 AL118520.1-201ENST00000450770 291 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 TRGVB-201ENST00000453257 471 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 RNU6-1095P-201ENST00000516148 108 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 MED28P6-201ENST00000558776 231 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 MTCO1P40-201ENST00000574371 625 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 MIR3616-201ENST00000584070 92 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 AP005137.2-201ENST00000609238 400 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.84□□□□□ -2.11
LRRC28Q86X40 AL450472.3-201ENST00000615578 367 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 AC132825.7-201ENST00000638744 335 ntBASIC1.84□□□□□ -2.11
LRRC28Q86X40 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LRRC28Q86X40 AL513185.3-201ENST00000433335 1300 ntBASIC1.84□□□□□ -2.12
LRRC28Q86X40 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LRRC28Q86X40 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
LRRC28Q86X40 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LRRC28Q86X40 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 SNORA11.4-201ENST00000408823 129 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 RPL17P12-201ENST00000413391 526 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 FCF1P2-201ENST00000415284 583 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 AL358075.3-201ENST00000426289 226 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 EZH2P1-201ENST00000431167 291 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 AC005345.1-201ENST00000431868 217 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 RPL23AP16-201ENST00000441715 421 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 AL050341.1-201ENST00000447743 313 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 RPS15AP27-201ENST00000449183 343 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 ANKRD26P4-201ENST00000455755 950 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 MTCO3P2-201ENST00000457365 171 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 RPS20P24-201ENST00000457473 361 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 RPL9P6-201ENST00000492764 598 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 RPS29P21-201ENST00000496272 170 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 MTCO2P9-201ENST00000503214 694 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 AC010468.3-201ENST00000508225 458 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 RNU6-27P-201ENST00000516146 107 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LRRC28Q86X40 ZNF705CP-201ENST00000530515 889 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 AC004852.3-201ENST00000614131 326 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LRRC28Q86X40 AC079395.3-201ENST00000615161 484 ntBASIC1.83□□□□□ -2.12
LRRC28Q86X40 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LRRC28Q86X40 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AC009487.4-201ENST00000624969 3585 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 SNORA68.1-201ENST00000364537 132 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 SNORD82-201ENST00000365530 70 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 SNORA51.6-201ENST00000384151 125 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 MIR525-201ENST00000384978 85 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 U3.20-201ENST00000390909 217 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 CIR1P3-201ENST00000405137 479 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AL023807.1-201ENST00000407932 359 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AL030996.1-201ENST00000411430 235 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AL133384.1-201ENST00000412744 351 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AC008173.1-201ENST00000418901 264 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 AC012497.1-201ENST00000429392 575 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 AL500527.1-201ENST00000448532 255 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 RNU7-140P-201ENST00000459546 60 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 COL6A4P2-205ENST00000509855 506 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 MRPS36P2-201ENST00000512569 299 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 SCARNA16.3-201ENST00000516595 184 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.82□□□□□ -2.12
LRRC28Q86X40 ARL2BPP5-201ENST00000523141 481 ntBASIC1.82□□□□□ -2.12
LRRC28Q86X40 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms