Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CSMD3Q7Z407 AC008127.2-201ENST00000549925 1075 ntBASIC0.96□□□□□ -2.26
CSMD3Q7Z407 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.96□□□□□ -2.26
CSMD3Q7Z407 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CSMD3Q7Z407 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CSMD3Q7Z407 AL034374.1-201ENST00000406329 351 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 AC109780.2-201ENST00000413467 845 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 AL022400.1-201ENST00000423946 935 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 LARP7P4-201ENST00000481075 878 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 AC090453.1-201ENST00000495560 436 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 RNU6-1331P-201ENST00000363658 106 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 MIR222-201ENST00000384992 110 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 AL589994.1-201ENST00000404962 340 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 SUMO1P4-201ENST00000429430 302 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 AC104472.2-201ENST00000469035 601 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 RNU1-40P-201ENST00000516816 164 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 RNU1-97P-201ENST00000516872 164 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 SETP2-201ENST00000553886 926 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 MIR3618-201ENST00000580330 88 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 AP000676.4-201ENST00000624659 623 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 ZNF209P-201ENST00000593450 2304 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 VTRNA1-1-201ENST00000363120 99 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 MTATP6P4-201ENST00000427725 675 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 MTCO3P35-201ENST00000485582 781 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 CBX3P8-201ENST00000532412 525 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 AC012640.5-201ENST00000623897 319 ntBASIC0.95□□□□□ -2.26
CSMD3Q7Z407 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.95□□□□□ -2.26
CSMD3Q7Z407 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 Y_RNA.115-201ENST00000363272 98 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 MIR153-1-201ENST00000384914 90 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 SNORA67.6-201ENST00000391093 99 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC114973.1-201ENST00000429057 632 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 MTCO1P48-201ENST00000448024 1096 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 SSXP4-201ENST00000451349 245 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC239860.2-201ENST00000525886 270 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC084364.2-201ENST00000546924 395 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC010735.1-201ENST00000567305 1026 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AP001029.3-201ENST00000588063 596 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC009220.3-201ENST00000604318 586 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC090525.3-201ENST00000605601 189 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC012213.4-201ENST00000606457 354 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AL158801.5-201ENST00000623123 465 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC116563.2-201ENST00000624751 535 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 Y_RNA.258-201ENST00000364613 105 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 RPL26P37-201ENST00000411983 438 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC244098.2-201ENST00000422068 99 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 RPS6P15-201ENST00000431996 751 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 HMGN2P21-201ENST00000447764 270 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AL583843.1-201ENST00000456070 346 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC090515.1-201ENST00000465295 476 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 RNU6-711P-201ENST00000517255 106 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 FAM106CP-201ENST00000582212 507 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 YWHAQP7-201ENST00000603536 658 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AL161912.3-201ENST00000605404 628 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 RNA5SP393-201ENST00000363423 117 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 RPS12P24-201ENST00000412619 387 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 SNRPEP4-201ENST00000435815 279 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC009474.2-201ENST00000451383 136 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 DYNLL1P5-201ENST00000467158 270 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 RNU6-56P-201ENST00000516986 93 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC105245.1-201ENST00000581934 244 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC097504.2-201ENST00000608088 454 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC004241.3-201ENST00000611728 517 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC139769.3-201ENST00000618383 175 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC007275.1-201ENST00000621243 671 ntBASIC0.94□□□□□ -2.26
CSMD3Q7Z407 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
CSMD3Q7Z407 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms