Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 RNA5SP183-201ENST00000362452 119 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 Y_RNA.240-201ENST00000364469 95 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 Y_RNA.292-201ENST00000364904 97 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-290P-201ENST00000365212 101 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-937P-201ENST00000384325 106 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 RNY3P4-201ENST00000384428 101 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 ENSAP1-201ENST00000392855 326 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 HSPA8P15-201ENST00000401676 786 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 RPL19P1-201ENST00000411635 428 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AL353621.1-201ENST00000418219 243 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AC140479.3-201ENST00000418944 1126 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 GAPDHP58-201ENST00000438477 1006 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 RPL23AP2-201ENST00000471227 466 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-62P-201ENST00000516526 102 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AC044860.2-201ENST00000561005 179 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AC018552.1-201ENST00000562099 811 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 MIR7853-201ENST00000584820 132 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 SMG1P7-201ENST00000565246 2704 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 BX322639.1-202ENST00000423987 2213 ntBASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 GVINP1-202ENST00000531871 7271 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 SNORA70-201ENST00000384436 135 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 MIR223-201ENST00000385204 110 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 MIR190B-201ENST00000401119 79 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 AL033519.2-201ENST00000403958 392 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 AC063979.1-201ENST00000415539 377 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 RN7SL515P-201ENST00000463999 297 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 AC087477.1-201ENST00000465747 340 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 AC023424.1-201ENST00000496058 459 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 RPS27AP13-201ENST00000498403 237 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 ENPP7P11-201ENST00000505915 627 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-313P-201ENST00000516317 112 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 SNORA31.18-201ENST00000517043 134 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 RNA5SP373-201ENST00000517271 95 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 AL590705.4-201ENST00000532209 134 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 MRPS18CP4-201ENST00000535821 231 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 RPL21P7-201ENST00000557463 483 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 C4BPAP1-201ENST00000415474 1893 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 PABPC1P6-201ENST00000445594 1829 ntBASIC5.34□□□□□ -1.55
LYSMD3Q7Z3D4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AC097461.1-201ENST00000568928 2821 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 Y_RNA.233-201ENST00000364407 101 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 MIR105-1-201ENST00000385222 81 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-1154P-201ENST00000391001 104 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AC013442.1-201ENST00000397347 228 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 MTCYBP2-201ENST00000407745 171 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 U3.39-201ENST00000408569 239 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 RPS27P18-201ENST00000431701 247 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AC093414.1-201ENST00000434712 514 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 PIGFP3-201ENST00000441918 722 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 RPS11P7-201ENST00000442125 465 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 RANP8-201ENST00000444720 713 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 PRDX3P3-201ENST00000447765 522 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 RPL23AP81-201ENST00000455252 467 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 HSPE1P25-201ENST00000455484 251 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 BDH2P1-201ENST00000602288 736 ntBASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.33□□□□□ -1.56
LYSMD3Q7Z3D4 AC097372.5-201ENST00000623665 376 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms