Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 Y_RNA.687-201ENST00000516558 91 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AC004024.1-201ENST00000549244 247 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AC126177.3-201ENST00000551839 688 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AC004584.2-201ENST00000570407 410 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 RN7SL652P-201ENST00000577769 300 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 RN7SL290P-201ENST00000578661 300 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 MIR1254-2-201ENST00000579553 63 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 ELOCP5-201ENST00000604924 333 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 RNA5SP439-201ENST00000617595 124 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 CR392039.4-201ENST00000624968 501 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AC005183.1-201ENST00000603687 1979 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 SNORD81.1-201ENST00000363064 77 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 RNU6-1329P-201ENST00000365664 107 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 RN7SKP267-201ENST00000410381 285 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AC140479.3-201ENST00000418944 1126 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 RN7SL517P-201ENST00000462240 305 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AP000926.1-201ENST00000479573 241 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 RPL21P103-201ENST00000479921 488 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 RN7SL558P-201ENST00000497468 299 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 RNU6-1338P-201ENST00000516328 91 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 Y_RNA.719-201ENST00000517156 106 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AC023575.1-201ENST00000580510 358 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 MIR4273-201ENST00000582824 84 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AC006363.1-201ENST00000603806 463 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 MIR1244-1-201ENST00000612829 85 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AC243654.2-201ENST00000612843 443 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 MIR1244-3-201ENST00000635744 85 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 MIR1244-2-201ENST00000636449 85 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 MIR1244-4-202ENST00000636813 85 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 TLK1P1-201ENST00000456760 2440 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 ZNF285B-201ENST00000561698 1767 ntBASIC6.1□□□□□ -1.43
RC3H1Q5TC82 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RC3H1Q5TC82 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 RNU1-76P-201ENST00000362903 159 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 RNU6-1317P-201ENST00000364582 104 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 MIR628-201ENST00000385229 95 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 SNORA57.1-201ENST00000391227 145 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 RPS12P5-201ENST00000423449 371 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 FABP5P13-201ENST00000452144 328 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 AC109327.1-201ENST00000471666 403 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 SERF1AP1-201ENST00000514575 187 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 Y_RNA.713-201ENST00000517013 96 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 IGKV2-38-201ENST00000517443 247 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 MRPS36P4-201ENST00000534436 298 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 AC007224.1-201ENST00000564410 144 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 MIR4643-201ENST00000577473 78 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 RAD17P1-201ENST00000418130 2042 ntBASIC6.09□□□□□ -1.43
RC3H1Q5TC82 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms