Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MIR4260-201ENST00000583107 67 ntBASIC6.2□□□□□ -1.42
VARS2Q5ST30 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.2□□□□□ -1.42
VARS2Q5ST30 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.2□□□□□ -1.42
VARS2Q5ST30 FO393422.1-201ENST00000603908 708 ntBASIC6.2□□□□□ -1.42
VARS2Q5ST30 AL355816.1-201ENST00000607951 118 ntBASIC6.2□□□□□ -1.42
VARS2Q5ST30 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC6.2□□□□□ -1.42
VARS2Q5ST30 AP001318.4-201ENST00000616637 121 ntBASIC6.2□□□□□ -1.42
VARS2Q5ST30 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.2□□□□□ -1.42
VARS2Q5ST30 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VARS2Q5ST30 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VARS2Q5ST30 ZNF702P-202ENST00000434269 1966 ntBASIC6.2□□□□□ -1.42
VARS2Q5ST30 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VARS2Q5ST30 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VARS2Q5ST30 C4BPAP1-201ENST00000415474 1893 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 GTF2IP4-201ENST00000453092 2054 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 AC068538.1-201ENST00000376856 336 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 SNORA70.9-201ENST00000384370 135 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 RPL23AP75-201ENST00000491601 451 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 SUMO2P6-201ENST00000505273 288 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 RNU5F-2P-201ENST00000516066 82 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 MIR2117-201ENST00000516780 80 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 IGBP1P1-201ENST00000554337 1009 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 MIR7155-201ENST00000615925 56 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 U1.34-201ENST00000618578 162 ntBASIC6.19□□□□□ -1.42
VARS2Q5ST30 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VARS2Q5ST30 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VARS2Q5ST30 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 RNU6-643P-201ENST00000384018 107 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 RNU6-1248P-201ENST00000391096 64 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 RPS3AP1-201ENST00000413190 320 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 RN7SL826P-201ENST00000479724 288 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 RPL32P33-201ENST00000487023 394 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 RPS15AP34-201ENST00000487776 387 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 AL035690.1-201ENST00000490892 383 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 BX510359.5-201ENST00000515651 304 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 AC005476.1-201ENST00000554427 397 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 AC133485.4-201ENST00000561835 220 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 AC138907.4-201ENST00000570107 226 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 TEX41-243ENST00000614173 190 ntTSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 PROS2P-201ENST00000474651 1951 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 LINC01109-201ENST00000603837 3081 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 AC007842.1-201ENST00000597336 2039 ntBASIC6.18□□□□□ -1.42
VARS2Q5ST30 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VARS2Q5ST30 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARS2Q5ST30 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms