Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC020893.1-201ENST00000502452 580 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 NDUFB4P2-201ENST00000509515 391 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.57□□□□□ -1.84
USP41Q3LFD5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.57□□□□□ -1.84
USP41Q3LFD5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.57□□□□□ -1.84
USP41Q3LFD5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.57□□□□□ -1.84
USP41Q3LFD5 AP003467.2-201ENST00000520175 319 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 HMGN1P28-201ENST00000521340 364 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 AP003181.2-201ENST00000528941 181 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP41Q3LFD5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.57□□□□□ -1.84
USP41Q3LFD5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.57□□□□□ -1.84
USP41Q3LFD5 MIR3690-201ENST00000580266 75 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 COX6CP3-201ENST00000580869 223 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 HMGN1P30-201ENST00000589286 268 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 AC015871.2-201ENST00000603605 948 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 AC011468.4-201ENST00000603942 409 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 AC007038.2-201ENST00000608095 740 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 AC108747.1-201ENST00000609508 535 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 AC006023.2-201ENST00000609916 167 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 AC131902.3-201ENST00000611767 581 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP41Q3LFD5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.57□□□□□ -1.84
USP41Q3LFD5 AL450472.3-201ENST00000615578 367 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 AC138932.5-201ENST00000617759 563 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 AC048347.1-201ENST00000624621 427 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 U6.98-201ENST00000637157 84 ntBASIC3.57□□□□□ -1.84
USP41Q3LFD5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP41Q3LFD5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP41Q3LFD5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP41Q3LFD5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP41Q3LFD5 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 RNA5SP374-201ENST00000362939 125 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 OR5H15-201ENST00000383696 930 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 RNU6-432P-201ENST00000384196 109 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 MIR19A-201ENST00000384878 82 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 RPS3AP24-201ENST00000407896 734 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 RPS3AP3-201ENST00000411933 242 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 CDK8P2-201ENST00000415020 547 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 BX890604.2-201ENST00000427883 474 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 VDAC1P3-201ENST00000434069 851 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC004866.2-201ENST00000438285 481 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 VN1R17P-201ENST00000472048 1090 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 MTND1P3-201ENST00000484956 952 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 FCF1P3-201ENST00000496394 590 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP41Q3LFD5 RN7SKP244-201ENST00000516513 307 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AP002963.1-201ENST00000530590 184 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AP000889.1-201ENST00000530968 660 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AP003122.4-201ENST00000530980 758 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 SNRPGP16-201ENST00000533275 226 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP41Q3LFD5 MIR4325-201ENST00000583049 90 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AP001330.4-201ENST00000604350 154 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 RNU6-87P-201ENST00000607561 108 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC006566.1-201ENST00000608943 513 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC004908.2-201ENST00000609090 574 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AP000254.1-201ENST00000609934 520 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC090970.3-201ENST00000612566 866 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC009509.4-201ENST00000619202 509 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC022149.2-201ENST00000621061 203 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AL356321.1-201ENST00000621360 228 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AL590240.3-201ENST00000621416 943 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AL360181.4-201ENST00000621752 134 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 AC110994.2-201ENST00000635481 492 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP41Q3LFD5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP41Q3LFD5 ZNF826P-207ENST00000622273 1910 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.56□□□□□ -1.84
USP41Q3LFD5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP41Q3LFD5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.55□□□□□ -1.84
USP41Q3LFD5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP41Q3LFD5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP41Q3LFD5 GNG5P1-201ENST00000255500 204 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 RNU6-173P-201ENST00000364215 104 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 RNU4-75P-201ENST00000364621 146 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 RNY4P34-201ENST00000364779 95 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.55□□□□□ -1.84
USP41Q3LFD5 RNU6-348P-201ENST00000384386 107 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 EI24P2-201ENST00000397776 1076 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 MRPL42P2-201ENST00000403169 426 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 AL136116.1-201ENST00000403591 381 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 MTND1P21-201ENST00000412991 285 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 AL353678.1-201ENST00000422735 741 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 DUTP6-201ENST00000425573 462 ntBASIC3.55□□□□□ -1.84
USP41Q3LFD5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms