Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MIR499A-201ENST00000384903 122 ntBASIC2.04□□□□□ -2.08
RFX7Q2KHR2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AP1B1P2-201ENST00000416196 106 ntBASIC2.04□□□□□ -2.08
RFX7Q2KHR2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AL163540.1-201ENST00000485382 386 ntBASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AC093281.2-201ENST00000510153 597 ntBASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AC090616.3-201ENST00000582184 217 ntBASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AC025588.4-201ENST00000615802 908 ntBASIC2.04□□□□□ -2.08
RFX7Q2KHR2 RNU6-156P-201ENST00000621869 107 ntBASIC2.04□□□□□ -2.08
RFX7Q2KHR2 AL031601.2-202ENST00000622650 282 ntBASIC2.04□□□□□ -2.08
RFX7Q2KHR2 HPVC1-201ENST00000629899 1198 ntBASIC2.04□□□□□ -2.08
RFX7Q2KHR2 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RFX7Q2KHR2 CENPCP1-201ENST00000533085 2578 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 RNU1-105P-201ENST00000363470 161 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 SNORA67.5-201ENST00000391036 107 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 ARL2BPP3-201ENST00000421226 480 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.03□□□□□ -2.08
RFX7Q2KHR2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.03□□□□□ -2.08
RFX7Q2KHR2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RFX7Q2KHR2 AL627224.1-201ENST00000448334 444 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 AC078857.1-201ENST00000469870 667 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 AC111193.1-201ENST00000504097 155 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX7Q2KHR2 AC117525.1-201ENST00000515228 503 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 RNA5SP445-201ENST00000515889 115 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.03□□□□□ -2.08
RFX7Q2KHR2 HMGB1P46-201ENST00000520062 610 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX7Q2KHR2 MIR3117-201ENST00000584034 78 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 MIR4658-201ENST00000584344 65 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 AP001542.2-201ENST00000593141 364 ntBASIC2.03□□□□□ -2.08
RFX7Q2KHR2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.03□□□□□ -2.08
RFX7Q2KHR2 AC004520.1-201ENST00000608362 1413 ntBASIC2.02□□□□□ -2.09
RFX7Q2KHR2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFX7Q2KHR2 RNA5SP27-201ENST00000363839 119 ntBASIC2.02□□□□□ -2.09
RFX7Q2KHR2 AL513475.1-201ENST00000406602 315 ntBASIC2.02□□□□□ -2.09
RFX7Q2KHR2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.02□□□□□ -2.09
RFX7Q2KHR2 AL356320.2-201ENST00000417263 507 ntBASIC2.02□□□□□ -2.09
RFX7Q2KHR2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.02□□□□□ -2.09
RFX7Q2KHR2 PSPHP1-201ENST00000450062 261 ntBASIC2.02□□□□□ -2.09
RFX7Q2KHR2 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
RFX7Q2KHR2 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.02□□□□□ -2.09
RFX7Q2KHR2 RPL36AP21-201ENST00000490372 323 ntBASIC2.02□□□□□ -2.09
RFX7Q2KHR2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.02□□□□□ -2.09
RFX7Q2KHR2 AC010546.1-201ENST00000569391 485 ntBASIC2.02□□□□□ -2.09
RFX7Q2KHR2 OR4G1P-201ENST00000588632 938 ntBASIC2.02□□□□□ -2.09
RFX7Q2KHR2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.02□□□□□ -2.09
RFX7Q2KHR2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.02□□□□□ -2.09
RFX7Q2KHR2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
RFX7Q2KHR2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.02□□□□□ -2.09
RFX7Q2KHR2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RFX7Q2KHR2 RNY1P10-201ENST00000363268 113 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 RNU5D-1-201ENST00000363299 116 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 SNORA25.9-201ENST00000365087 128 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 AL030996.1-201ENST00000411430 235 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.01□□□□□ -2.09
RFX7Q2KHR2 GPM6BP3-201ENST00000442797 145 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.01□□□□□ -2.09
RFX7Q2KHR2 RPL31P41-201ENST00000477967 372 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
RFX7Q2KHR2 AC006499.2-201ENST00000513470 337 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.01□□□□□ -2.09
RFX7Q2KHR2 POLR2KP1-201ENST00000553226 168 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 AC107214.2-201ENST00000608204 634 ntBASIC2.01□□□□□ -2.09
RFX7Q2KHR2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.01□□□□□ -2.09
RFX7Q2KHR2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RFX7Q2KHR2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2□□□□□ -2.09
RFX7Q2KHR2 RNU6-461P-201ENST00000364195 107 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 Z98749.2-208ENST00000381646 500 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 UBE2V1P13-201ENST00000436983 439 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2□□□□□ -2.09
RFX7Q2KHR2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2□□□□□ -2.09
RFX7Q2KHR2 AC245517.4-201ENST00000448601 281 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2□□□□□ -2.09
RFX7Q2KHR2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
RFX7Q2KHR2 AC016065.2-201ENST00000514530 444 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2□□□□□ -2.09
RFX7Q2KHR2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2□□□□□ -2.09
RFX7Q2KHR2 AC022616.2-201ENST00000523185 300 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RFX7Q2KHR2 OR4K8P-201ENST00000578842 1048 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 OR1M4P-201ENST00000589199 287 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 AL035411.2-201ENST00000604022 421 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 DPRXP5-201ENST00000604662 539 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 HSPE1P7-201ENST00000604681 321 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
RFX7Q2KHR2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2□□□□□ -2.09
RFX7Q2KHR2 ZNF876P-202ENST00000398732 1485 ntBASIC2□□□□□ -2.09
RFX7Q2KHR2 U3.29-201ENST00000391296 212 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.99□□□□□ -2.09
RFX7Q2KHR2 SNRPGP6-201ENST00000451124 220 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms