Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AC005094.1-201ENST00000440420 368 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 SNORD121B-201ENST00000458838 81 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 RPL30P10-201ENST00000488148 337 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AC022133.1-201ENST00000490961 571 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 RNU4-57P-201ENST00000515980 135 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 SNORA67.7-201ENST00000516664 135 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 FAM60BP-201ENST00000578364 658 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 MIR4420-201ENST00000583944 77 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AC024220.1-201ENST00000603675 484 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AL391516.1-201ENST00000554380 2449 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 SNORA70C-201ENST00000384538 135 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 TMEM167AP1-201ENST00000423409 219 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 RPL23AP38-201ENST00000423801 469 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 AL358232.1-201ENST00000448030 501 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 FABP5P13-201ENST00000452144 328 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 RPL30P1-201ENST00000488676 339 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 CYCTP-201ENST00000504253 315 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 RNU6-1333P-201ENST00000516162 93 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 RNU6-426P-201ENST00000516464 97 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 AL133271.1-201ENST00000538229 291 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 AC006130.2-201ENST00000586202 326 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 AC097372.5-201ENST00000623665 376 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 AC243829.7-201ENST00000633081 225 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 OR4F13P-202ENST00000560066 2054 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.91□□□□□ -1.62
RSPO4Q2I0M5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 AL355834.1-201ENST00000556602 3965 ntBASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RSPO4Q2I0M5 SNORD113.2-201ENST00000364166 89 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.215-201ENST00000364204 112 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 RNU6-923P-201ENST00000364753 107 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.333-201ENST00000365274 102 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 RNU6-449P-201ENST00000383914 107 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 AL139039.1-201ENST00000401900 692 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.590-201ENST00000410140 107 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 RNU6-651P-201ENST00000411040 105 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 RPS21P8-201ENST00000413365 247 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 MTCO1P5-201ENST00000433573 344 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 BX679664.1-201ENST00000434429 253 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 RN7SL432P-201ENST00000484057 298 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 RNA5SP143-201ENST00000516936 115 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 AC023632.4-201ENST00000517783 191 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 AC091144.1-201ENST00000519573 138 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms