Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCB1Q12824 RNU2-47P-201ENST00000410649 186 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 MTCO2P8-201ENST00000412213 658 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AC009963.1-201ENST00000417265 157 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AC092648.1-201ENST00000425870 423 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCB1Q12824 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SMARCB1Q12824 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCB1Q12824 ST13P20-201ENST00000447996 1065 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMARCB1Q12824 ZNF886P-201ENST00000450781 723 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMARCB1Q12824 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCB1Q12824 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCB1Q12824 AC073901.1-201ENST00000462471 408 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AC006390.1-201ENST00000508068 283 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCB1Q12824 RNU6-1095P-201ENST00000516148 108 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMARCB1Q12824 AC027176.1-201ENST00000560204 514 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AC009163.5-201ENST00000575421 637 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AP001269.3-201ENST00000588718 329 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AC055876.5-201ENST00000605667 259 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AL138880.2-201ENST00000616214 239 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 AC004009.2-201ENST00000623016 728 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 OR4G3P-201ENST00000633500 913 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SMARCB1Q12824 CUL1P1-201ENST00000509510 2425 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SMARCB1Q12824 MAPK10-266ENST00000641066 6555 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 RNU6-1074P-201ENST00000383995 104 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 RNA5SP210-201ENST00000391034 120 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AL137014.1-201ENST00000420490 1226 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 USP9YP11-201ENST00000427537 717 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AL590233.1-201ENST00000430017 456 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 FCF1P1-201ENST00000432690 571 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 RPL23AP74-201ENST00000437246 471 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 MTCO2P20-201ENST00000437339 673 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 AL353691.1-201ENST00000451332 387 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC234775.1-201ENST00000454247 670 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 Z82190.1-201ENST00000454534 490 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 RNA5SP310-201ENST00000459084 116 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC008716.1-201ENST00000511084 513 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC093677.1-201ENST00000514414 678 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC018630.1-201ENST00000541376 925 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 HSPE1P3-201ENST00000559254 309 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AL049838.1-201ENST00000563647 981 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SMARCB1Q12824 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 MIR3945-201ENST00000581853 98 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 MIR5194-201ENST00000582634 120 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 NUTF2P8-201ENST00000604593 363 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC010738.1-201ENST00000604970 987 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC009974.1-201ENST00000608881 455 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AL161734.1-201ENST00000609720 557 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 AC013412.1-201ENST00000610687 192 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 CRYM-AS1-204ENST00000637983 556 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.6□□□□□ -1.99
SMARCB1Q12824 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCB1Q12824 RNU6-1155P-201ENST00000363554 107 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 RNU6-560P-201ENST00000364007 108 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 RNU6-878P-201ENST00000384578 110 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 SNORA41-201ENST00000384675 132 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 RPL23AP29-201ENST00000397284 453 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SMARCB1Q12824 AL135786.1-201ENST00000415892 214 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 AC099677.1-201ENST00000420575 175 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 MYL8P-204ENST00000431574 518 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 AL645638.1-201ENST00000440519 361 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.59□□□□□ -1.99
SMARCB1Q12824 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCB1Q12824 AC023424.2-201ENST00000493479 777 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 AC090453.1-201ENST00000495560 436 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 RN7SL636P-201ENST00000497504 294 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCB1Q12824 RNU6-583P-201ENST00000516012 92 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 RN7SKP40-201ENST00000517211 242 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.59□□□□□ -1.99
SMARCB1Q12824 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SMARCB1Q12824 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCB1Q12824 AC009063.1-201ENST00000563342 702 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCB1Q12824 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCB1Q12824 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.59□□□□□ -1.99
SMARCB1Q12824 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.59□□□□□ -1.99
SMARCB1Q12824 AC010620.2-201ENST00000600135 313 ntBASIC2.59□□□□□ -1.99
SMARCB1Q12824 AC007938.3-201ENST00000604965 623 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms