Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
SSRP1Q08945 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SSRP1Q08945 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSRP1Q08945 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.73□□□□□ -1.65
SSRP1Q08945 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSRP1Q08945 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSRP1Q08945 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSRP1Q08945 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSRP1Q08945 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SSRP1Q08945 RPL32P3-201ENST00000359025 275 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 RHOT1P2-201ENST00000366423 333 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 RNU6-38P-201ENST00000384085 107 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 UBE2V1P2-201ENST00000397758 440 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 RNU4-46P-201ENST00000410818 138 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 RWDD4P2-201ENST00000426392 563 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 AC008850.1-201ENST00000427546 362 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.73□□□□□ -1.65
SSRP1Q08945 NEFMP1-201ENST00000443423 1006 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 UBE2V1P7-201ENST00000446395 340 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 AC020550.1-201ENST00000447385 163 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.73□□□□□ -1.65
SSRP1Q08945 RNU6-333P-201ENST00000459117 107 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.73□□□□□ -1.65
SSRP1Q08945 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.73□□□□□ -1.65
SSRP1Q08945 RNU6-352P-201ENST00000516908 107 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 MRPL49P2-201ENST00000521066 465 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.73□□□□□ -1.65
SSRP1Q08945 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.73□□□□□ -1.65
SSRP1Q08945 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.73□□□□□ -1.65
SSRP1Q08945 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.73□□□□□ -1.65
SSRP1Q08945 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.73□□□□□ -1.65
SSRP1Q08945 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.73□□□□□ -1.65
SSRP1Q08945 MIR4719-201ENST00000585233 84 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 AC013553.2-201ENST00000604244 589 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 LINC00901.1-201ENST00000617252 152 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 uc_338.34-201ENST00000617467 174 ntBASIC4.73□□□□□ -1.65
SSRP1Q08945 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SSRP1Q08945 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.73□□□□□ -1.65
SSRP1Q08945 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SSRP1Q08945 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
SSRP1Q08945 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSRP1Q08945 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSRP1Q08945 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSRP1Q08945 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SSRP1Q08945 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSRP1Q08945 SNORA60-201ENST00000362396 134 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 Y_RNA.142-201ENST00000363491 102 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 SNORA36C-201ENST00000384289 132 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 RNU4-26P-201ENST00000410270 107 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 HSPE1P12-201ENST00000412576 301 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.72□□□□□ -1.65
SSRP1Q08945 TOMM22P1-201ENST00000418578 312 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.72□□□□□ -1.65
SSRP1Q08945 RPL7P46-201ENST00000425129 740 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.72□□□□□ -1.65
SSRP1Q08945 MTCO3P46-201ENST00000425787 232 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.72□□□□□ -1.65
SSRP1Q08945 AC069285.2-201ENST00000440210 275 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 RPS24P6-201ENST00000452670 400 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.72□□□□□ -1.65
SSRP1Q08945 RPS23P7-201ENST00000466210 444 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.72□□□□□ -1.65
SSRP1Q08945 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.72□□□□□ -1.65
SSRP1Q08945 AC117522.3-201ENST00000507974 584 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 RN7SKP258-201ENST00000517151 304 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.72□□□□□ -1.65
SSRP1Q08945 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.72□□□□□ -1.65
SSRP1Q08945 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.72□□□□□ -1.65
SSRP1Q08945 AC008521.1-201ENST00000587471 187 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 AC067852.3-201ENST00000589177 561 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 BDH2P1-201ENST00000602288 736 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 AC174048.1-201ENST00000603389 144 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 MIR6716-201ENST00000613413 80 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 AC093913.1-201ENST00000614178 329 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 AL360181.4-201ENST00000621752 134 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 OR52H1-202ENST00000641796 1061 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SSRP1Q08945 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSRP1Q08945 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SSRP1Q08945 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
SSRP1Q08945 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SSRP1Q08945 ZNF962P-201ENST00000443465 3140 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.72□□□□□ -1.65
SSRP1Q08945 TPTE2P4-201ENST00000258589 1605 ntBASIC4.72□□□□□ -1.65
SSRP1Q08945 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.71□□□□□ -1.65
SSRP1Q08945 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.71□□□□□ -1.66
SSRP1Q08945 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.71□□□□□ -1.66
SSRP1Q08945 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSRP1Q08945 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSRP1Q08945 RNU6-1181P-201ENST00000384191 106 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 MIR93-201ENST00000385024 80 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSRP1Q08945 RPL32P23-201ENST00000397237 405 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 HSPD1P16-201ENST00000402302 394 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 RPL30P2-201ENST00000414021 291 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.71□□□□□ -1.66
SSRP1Q08945 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.71□□□□□ -1.66
SSRP1Q08945 PDCL2P1-201ENST00000419302 352 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms