Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL139276.1-201ENST00000311910 1001 ntBASIC3.67□□□□□ -1.82
RAE1P78406 RPL7P26-201ENST00000333817 754 ntBASIC3.67□□□□□ -1.82
RAE1P78406 RNU6-188P-201ENST00000364207 107 ntBASIC3.67□□□□□ -1.82
RAE1P78406 RNU1-13P-201ENST00000384499 162 ntBASIC3.67□□□□□ -1.82
RAE1P78406 RNU6-373P-201ENST00000411247 98 ntBASIC3.67□□□□□ -1.82
RAE1P78406 RPL21P111-201ENST00000418453 477 ntBASIC3.67□□□□□ -1.82
RAE1P78406 TOMM22P1-201ENST00000418578 312 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.67□□□□□ -1.82
RAE1P78406 AC012498.1-201ENST00000424037 437 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.67□□□□□ -1.82
RAE1P78406 ATP5JP1-201ENST00000431631 322 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.67□□□□□ -1.82
RAE1P78406 AC024082.2-201ENST00000434771 238 ntBASIC3.67□□□□□ -1.82
RAE1P78406 RPL26P6-201ENST00000440913 438 ntBASIC3.67□□□□□ -1.82
RAE1P78406 MTND4P25-201ENST00000441039 533 ntBASIC3.67□□□□□ -1.82
RAE1P78406 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.67□□□□□ -1.82
RAE1P78406 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.67□□□□□ -1.82
RAE1P78406 AC018710.1-201ENST00000506509 158 ntBASIC3.67□□□□□ -1.82
RAE1P78406 KLHL2P1-201ENST00000508691 521 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AC098799.2-201ENST00000509466 868 ntBASIC3.67□□□□□ -1.82
RAE1P78406 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.67□□□□□ -1.82
RAE1P78406 AC025465.4-201ENST00000513422 638 ntBASIC3.67□□□□□ -1.82
RAE1P78406 RNA5SP401-201ENST00000515920 127 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.67□□□□□ -1.82
RAE1P78406 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.67□□□□□ -1.82
RAE1P78406 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.67□□□□□ -1.82
RAE1P78406 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.67□□□□□ -1.82
RAE1P78406 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.67□□□□□ -1.82
RAE1P78406 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.67□□□□□ -1.82
RAE1P78406 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.67□□□□□ -1.82
RAE1P78406 AC107016.1-201ENST00000550463 337 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.67□□□□□ -1.82
RAE1P78406 AC015917.1-201ENST00000579654 510 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AC024619.4-201ENST00000580924 316 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.67□□□□□ -1.82
RAE1P78406 AL590392.1-201ENST00000604960 446 ntBASIC3.67□□□□□ -1.82
RAE1P78406 MIR378J-201ENST00000611988 109 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AC068831.8-201ENST00000620171 435 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AC006504.8-201ENST00000621046 635 ntBASIC3.67□□□□□ -1.82
RAE1P78406 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.67□□□□□ -1.82
RAE1P78406 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.67□□□□□ -1.82
RAE1P78406 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.67□□□□□ -1.82
RAE1P78406 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RAE1P78406 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
RAE1P78406 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.67□□□□□ -1.82
RAE1P78406 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
RAE1P78406 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RAE1P78406 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RAE1P78406 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RAE1P78406 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 NCAPGP1-201ENST00000505112 1814 ntBASIC3.66□□□□□ -1.82
RAE1P78406 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.66□□□□□ -1.82
RAE1P78406 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RAE1P78406 MIR372-201ENST00000362225 67 ntBASIC3.66□□□□□ -1.82
RAE1P78406 Y_RNA.157-201ENST00000363638 102 ntBASIC3.66□□□□□ -1.82
RAE1P78406 Y_RNA.160-201ENST00000363677 92 ntBASIC3.66□□□□□ -1.82
RAE1P78406 RNU6-173P-201ENST00000364215 104 ntBASIC3.66□□□□□ -1.82
RAE1P78406 RAP1BP3-201ENST00000407180 549 ntBASIC3.66□□□□□ -1.82
RAE1P78406 SNORA11B-201ENST00000408175 129 ntBASIC3.66□□□□□ -1.82
RAE1P78406 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.66□□□□□ -1.82
RAE1P78406 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.66□□□□□ -1.82
RAE1P78406 FTH1P6-201ENST00000430768 320 ntBASIC3.66□□□□□ -1.82
RAE1P78406 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 OR4C10P-201ENST00000434991 931 ntBASIC3.66□□□□□ -1.82
RAE1P78406 USP9YP7-201ENST00000436723 430 ntBASIC3.66□□□□□ -1.82
RAE1P78406 SNORA71B-202ENST00000439232 272 ntBASIC3.66□□□□□ -1.82
RAE1P78406 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 USP9YP32-201ENST00000452432 430 ntBASIC3.66□□□□□ -1.82
RAE1P78406 RPL21P11-201ENST00000461458 483 ntBASIC3.66□□□□□ -1.82
RAE1P78406 RN7SL93P-201ENST00000463035 293 ntBASIC3.66□□□□□ -1.82
RAE1P78406 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 RPL38P4-201ENST00000502376 214 ntBASIC3.66□□□□□ -1.82
RAE1P78406 RAC1P2-201ENST00000511164 579 ntBASIC3.66□□□□□ -1.82
RAE1P78406 RNA5SP208-201ENST00000516156 78 ntBASIC3.66□□□□□ -1.82
RAE1P78406 RNA5SP503-201ENST00000517047 117 ntBASIC3.66□□□□□ -1.82
RAE1P78406 RNU6-840P-201ENST00000517275 65 ntBASIC3.66□□□□□ -1.82
RAE1P78406 AC008489.1-201ENST00000524271 483 ntBASIC3.66□□□□□ -1.82
RAE1P78406 AP005435.4-201ENST00000529514 284 ntBASIC3.66□□□□□ -1.82
RAE1P78406 AC103843.2-201ENST00000530523 682 ntBASIC3.66□□□□□ -1.82
RAE1P78406 OR5AL2P-201ENST00000532185 920 ntBASIC3.66□□□□□ -1.82
RAE1P78406 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
RAE1P78406 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.66□□□□□ -1.82
RAE1P78406 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.66□□□□□ -1.82
RAE1P78406 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.66□□□□□ -1.82
RAE1P78406 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.66□□□□□ -1.82
RAE1P78406 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 FAM60BP-201ENST00000578364 658 ntBASIC3.66□□□□□ -1.82
RAE1P78406 AC005730.3-201ENST00000583067 366 ntBASIC3.66□□□□□ -1.82
RAE1P78406 AC010928.3-201ENST00000587712 541 ntBASIC3.66□□□□□ -1.82
RAE1P78406 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.66□□□□□ -1.82
RAE1P78406 AL592436.1-201ENST00000605135 558 ntBASIC3.66□□□□□ -1.82
RAE1P78406 BRDTP1-201ENST00000605735 677 ntBASIC3.66□□□□□ -1.82
RAE1P78406 SDR42E1P2-201ENST00000614861 481 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms